RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 FABP7O15540 132 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 PF4P02776 101 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 EGR2P11161 476 aaPredicted RBP9.49□□□□□ -0.89
LIG1-217ENST00000599165 CD33P20138 364 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 FOXE3Q13461 319 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 KCTD21Q4G0X4 260 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 TEX38Q6PEX7 206 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 KLHL30-AS1Q8NEE0 82 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 OR4A4PQ8NGN8 299 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 KCTD7Q96MP8 289 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 KLK15Q9H2R5 256 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 OR51J1Q9H342 316 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.49□□□□□ -0.89
LIG1-217ENST00000599165 MGAT4AQ9UM21 535 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 RRP15Q9Y3B9 282 aaKnown RBP9.49□□□□□ -0.89
LIG1-217ENST00000599165 A0A075B6Q4 140 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 OR5H14A6NHG9 310 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 SOX15O60248 233 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 IGKV1-16P04430 117 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 ELANEP08246 267 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 GADD45AP24522 165 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 SDC2P34741 201 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 SLC35B1P78383 322 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 SSBP2P81877 361 aaPredicted RBP9.48□□□□□ -0.89
LIG1-217ENST00000599165 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 SFXN4Q6P4A7 337 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 Q6ZS49 121 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 ZNF695Q8IW36 515 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 FBXL15Q9H469 300 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 NECAP2Q9NVZ3 263 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 GAB2Q9UQC2 676 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
LIG1-217ENST00000599165 RRHO14718 337 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 HSPA12AO43301 675 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 SSX5O60225 188 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 MYCNOSP40205 109 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 CDX1P47902 265 aaPredicted RBP9.47□□□□□ -0.89
LIG1-217ENST00000599165 CRIP2P52943 208 aaPredicted RBP9.47□□□□□ -0.89
LIG1-217ENST00000599165 EGFEM1PQ0D2K5 195 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 NEDD8Q15843 81 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 ASPHD1Q5U4P2 390 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 LIN54Q6MZP7 749 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 TPRA1Q86W33 373 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 MINDY2Q8NBR6 621 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 OR5H6Q8NGV6 325 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 LGALS14Q8TCE9 139 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 EDARADDQ8WWZ3 215 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 SLC25A38Q96DW6 304 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 RCC1LQ96I51 464 aaKnown RBP9.47□□□□□ -0.89
LIG1-217ENST00000599165 CHCHD6Q9BRQ6 235 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 ATG5Q9H1Y0 275 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 GHITMQ9H3K2 345 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 SDHAF2Q9NX18 166 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 DAPK2Q9UIK4 370 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 WASHC3Q9Y3C0 194 aa9.47□□□□□ -0.89
LIG1-217ENST00000599165 K7EIL1 84 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 BET1O15155 118 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 RRP9O43818 475 aaKnown RBP9.46□□□□□ -0.9
LIG1-217ENST00000599165 DIRAS3O95661 229 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 IGLV2-23P01705 113 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 OR8U9P0C7N5 309 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 VDAC1P21796 283 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 SLC6A1P30531 599 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 HOXD3P31249 432 aaPredicted RBP9.46□□□□□ -0.9
LIG1-217ENST00000599165 TGFBR1P36897 503 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 SERPINB10P48595 397 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 CX3CL1P78423 397 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 FHL3Q13643 280 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 KIR2DS1Q14954 304 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 PSG5Q15238 335 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 SRSF7Q16629 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
LIG1-217ENST00000599165 MRGPRG-AS1Q2M3A8 158 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 ZNF260Q3ZCT1 412 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 CXorf66Q5JRM2 361 aaPredicted RBP9.46□□□□□ -0.9
LIG1-217ENST00000599165 H1FOOQ8IZA3 346 aaPredicted RBP9.46□□□□□ -0.9
LIG1-217ENST00000599165 OR8U1Q8NH10 309 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 GON7Q9BXV9 100 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 GNB4Q9HAV0 340 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 PARP11Q9NR21 331 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 SSR3Q9UNL2 185 aa9.46□□□□□ -0.9
LIG1-217ENST00000599165 TRAV41A0A0B4J266 112 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 METTL21EPA6NDL7 271 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 NUDT19A8MXV4 375 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 M0R1X1 148 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 CCL24O00175 119 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 CRYGBP07316 175 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 CD36P16671 472 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 MC5RP33032 325 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 RANBP1P43487 201 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 MXD1Q05195 221 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 CDNFQ49AH0 187 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 HACD4Q5VWC8 232 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 REC114Q7Z4M0 266 aa9.45□□□□□ -0.9
LIG1-217ENST00000599165 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.45□□□□□ -0.9
LIG1-217ENST00000599165 NUDCD2Q8WVJ2 157 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms