RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 RNF150Q9ULK6 438 aa11.49□□□□□ -0.57
XRCC1-208ENST00000598422 IGKV1-6A0A0C4DH72 117 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 ATP6V0E1O15342 81 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 RBBP9O75884 186 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 IGHG4P01861 327 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 APOA2P02652 100 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 TFAP2AP05549 437 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 MYCNOSP40205 109 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 RAB25P57735 213 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 NEDD8Q15843 81 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 KCTD21Q4G0X4 260 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 FOXB2Q5VYV0 432 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 TMEM65Q6PI78 240 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 ETV3LQ6ZN32 361 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 LCNL1Q6ZST4 164 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 NR2C2APQ86WQ0 139 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 DRAXINQ8NBI3 349 aaPredicted RBP11.48□□□□□ -0.57
XRCC1-208ENST00000598422 NPBQ8NG41 125 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 ABHD5Q8WTS1 349 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 RITA1Q96K30 269 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 CHCHD6Q9BRQ6 235 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 GINS4Q9BRT9 223 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 OR51J1Q9H342 316 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 DAPK2Q9UIK4 370 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 RRP15Q9Y3B9 282 aaKnown RBP11.48□□□□□ -0.57
XRCC1-208ENST00000598422 RBM7Q9Y580 266 aaKnown RBP11.48□□□□□ -0.57
XRCC1-208ENST00000598422 WSB1Q9Y6I7 421 aa11.48□□□□□ -0.57
XRCC1-208ENST00000598422 IGHV7-81A0A0B4J1V7 117 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 LOC100506127A0A0U1RQW1 187 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 M0R1X1 148 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 RRHO14718 337 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 SCGNO76038 276 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 NDUFA3O95167 84 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 CFHR3Q02985 330 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 SFXN4Q6P4A7 337 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 RNF152Q8N8N0 203 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
XRCC1-208ENST00000598422 OR5AN1Q8NGI8 311 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 OR8U1Q8NH10 309 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 MAFIPQ8WZ33 124 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 CABLES2Q9BTV7 478 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 CENPOQ9BU64 300 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 MCRIP2Q9BUT9 160 aaKnown RBP11.47□□□□□ -0.57
XRCC1-208ENST00000598422 OR2D2Q9H210 308 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 FBXL15Q9H469 300 aa11.47□□□□□ -0.57
XRCC1-208ENST00000598422 ZNF230Q9UIE0 474 aaPredicted RBP11.47□□□□□ -0.57
XRCC1-208ENST00000598422 NOTCH3Q9UM47 2321 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 CCL24O00175 119 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 DIRAS3O95661 229 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 OR8U9P0C7N5 309 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 GSTT2P0CG29 244 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 GSTT2BP0CG30 244 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 ECSCRQ19T08 205 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 IGSF11Q5DX21 431 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 LGALS14Q8TCE9 139 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 DUX3Q96PT4 197 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.57
XRCC1-208ENST00000598422 RNF5Q99942 180 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 VCX3AQ9NNX9 186 aa11.46□□□□□ -0.57
XRCC1-208ENST00000598422 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.57
XRCC1-208ENST00000598422 G3V318 75 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 SPDEFO95238 335 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 SNRPBP14678 240 aaKnown RBP11.45□□□□□ -0.58
XRCC1-208ENST00000598422 CD36P16671 472 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 DTYMKP23919 212 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 PSMB8P28062 276 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 SDC2P34741 201 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 CDX1P47902 265 aaPredicted RBP11.45□□□□□ -0.58
XRCC1-208ENST00000598422 RPS16P62249 146 aaKnown RBP11.45□□□□□ -0.58
XRCC1-208ENST00000598422 MXD1Q05195 221 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 CBX3Q13185 183 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 DEFB136Q30KP8 78 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 CDNFQ49AH0 187 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 ZNF660Q6AZW8 331 aaPredicted RBP11.45□□□□□ -0.58
XRCC1-208ENST00000598422 PDPNQ86YL7 162 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 C4orf3Q8WVX3 66 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 RAX2Q96IS3 184 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 P2RX4Q99571 388 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 METTL1Q9UBP6 276 aaKnown RBP11.45□□□□□ -0.58
XRCC1-208ENST00000598422 A3GALT2U3KPV4 340 aa11.45□□□□□ -0.58
XRCC1-208ENST00000598422 TRBV6-7A0A0A0MS04 114 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 GNG2P59768 71 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 CX3CL1P78423 397 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 PITPNAQ00169 270 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 NDPQ00604 133 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 FLYWCH2Q96CP2 140 aaKnown RBP11.44□□□□□ -0.58
XRCC1-208ENST00000598422 SLC35D1Q9NTN3 355 aa11.44□□□□□ -0.58
XRCC1-208ENST00000598422 A0A1W2PN81 502 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 TMEM235A6NFC5 223 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 PPIFP30405 207 aaKnown RBP11.43□□□□□ -0.58
XRCC1-208ENST00000598422 HOXD3P31249 432 aaPredicted RBP11.43□□□□□ -0.58
XRCC1-208ENST00000598422 CHRNA7P36544 502 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 TMEM267Q0VDI3 215 aaPredicted RBP11.43□□□□□ -0.58
XRCC1-208ENST00000598422 SRSF7Q16629 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
XRCC1-208ENST00000598422 RTL8BQ17RB0 113 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms