RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RAB27BO00194 218 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 FCN1O00602 326 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 RRHO14718 337 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 ATP6V0E1O15342 81 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 GSTP1P09211 210 aaKnown RBP11.77□□□□□ -0.53
LIG1-215ENST00000597901 GNB3P16520 340 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 RAB6AP20340 208 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 LINC00205P59089 165 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 MRPS15P82914 257 aaKnown RBP11.77□□□□□ -0.53
LIG1-215ENST00000597901 KIAA0141Q14154 515 aaPredicted RBP11.77□□□□□ -0.53
LIG1-215ENST00000597901 ZNF660Q6AZW8 331 aaPredicted RBP11.77□□□□□ -0.53
LIG1-215ENST00000597901 TMEM65Q6PI78 240 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 DRAXINQ8NBI3 349 aaPredicted RBP11.77□□□□□ -0.53
LIG1-215ENST00000597901 OR4A4PQ8NGN8 299 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 DPF1Q92782 380 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 RNF5Q99942 180 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 TOLLIPQ9H0E2 274 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 FBXL15Q9H469 300 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 Q9H521 79 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 PARP11Q9NR21 331 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 RDH8Q9NYR8 311 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 ZNF221Q9UK13 617 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 WASHC3Q9Y3C0 194 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 A0A0B4J203 849 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 TRAV41A0A0B4J266 112 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 METTL21EPA6NDL7 271 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 FABP7O15540 132 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 RBBP9O75884 186 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 GSTT2P0CG29 244 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 GSTT2BP0CG30 244 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 GADD45AP24522 165 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 FGF9P31371 208 aaPredicted RBP11.76□□□□□ -0.53
LIG1-215ENST00000597901 SERPINB10P48595 397 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 CX3CL1P78423 397 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 DEFB136Q30KP8 78 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 DEFB121Q5J5C9 76 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 NR2C2APQ86WQ0 139 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 ZNF491Q8N8L2 437 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 MINDY2Q8NBR6 621 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 OR8U1Q8NH10 309 aa11.76□□□□□ -0.53
LIG1-215ENST00000597901 A0A075B6Q4 140 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 MFNGO00587 321 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 FCGR3AP08637 254 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 PSMB9P28065 219 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 RAB9AP51151 201 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 RAB25P57735 213 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 PSG5Q15238 335 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 IGSF11Q5DX21 431 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 ZNF383Q8NA42 475 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 MYOZ3Q8TDC0 251 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 UBE2E2Q96LR5 201 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
LIG1-215ENST00000597901 ZNF230Q9UIE0 474 aaPredicted RBP11.75□□□□□ -0.53
LIG1-215ENST00000597901 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 NUBP2Q9Y5Y2 271 aa11.75□□□□□ -0.53
LIG1-215ENST00000597901 TRBV6-7A0A0A0MS04 114 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 BET1O15155 118 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 TFAP2AP05549 437 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 OR8U9P0C7N5 309 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
LIG1-215ENST00000597901 HIST1H1DP16402 221 aaKnown RBP11.74□□□□□ -0.53
LIG1-215ENST00000597901 RPS16P62249 146 aaKnown RBP11.74□□□□□ -0.53
LIG1-215ENST00000597901 PLGLAQ15195 96 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 OR11H1Q8NG94 326 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 FCGR1BQ92637 280 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 CLCC1Q96S66 551 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 VSIG4Q9Y279 399 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
LIG1-215ENST00000597901 SMIM30A4D0T7 59 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 NOTOA8MTQ0 251 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 IGKV1-16P04430 117 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 SNRPBP14678 240 aaKnown RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 TALDO1P37837 337 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 NDPQ00604 133 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 ARFRP1Q13795 201 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
LIG1-215ENST00000597901 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 C19orf54Q5BKX5 351 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 ZNF562Q6V9R5 426 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 TPRA1Q86W33 373 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 OR1N2Q8NGR9 330 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 MAFIPQ8WZ33 124 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 FLYWCH2Q96CP2 140 aaKnown RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 TSNAXQ99598 290 aaKnown RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 CABLES2Q9BTV7 478 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 METTL1Q9UBP6 276 aaKnown RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 ZMAT5Q9UDW3 170 aaKnown RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 ELF5Q9UKW6 265 aaPredicted RBP11.73□□□□□ -0.53
LIG1-215ENST00000597901 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 SSR3Q9UNL2 185 aa11.73□□□□□ -0.53
LIG1-215ENST00000597901 DNAH3Q8TD57 4116 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms