RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 TMEM11P17152 192 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 RORCP51449 518 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 KRTAP10-11P60412 298 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 LSAMPQ13449 338 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 EBI3Q14213 229 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 HES1Q14469 280 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 RPL39P5Q59GN2 51 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 Q8N6K4 173 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 DIABLOQ9NR28 239 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 WI2-2373I1.2A0A1W2PRP0 233 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 A0A1W2PRX2 142 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 TXNL1O43396 289 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 XRCC3O43542 346 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 PF4V1P10720 104 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 TAS2R20P59543 309 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 PITPNAQ00169 270 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 HNF4GQ14541 408 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 GVQW1Q8N7I0 195 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 EDARADDQ8WWZ3 215 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 S100A16Q96FQ6 103 aaKnown RBP12.6□□□□□ -0.39
USHBP1-206ENST00000596436 EAF1Q96JC9 268 aaPredicted RBP12.6□□□□□ -0.39
USHBP1-206ENST00000596436 NABP2Q9BQ15 211 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 RNF150Q9ULK6 438 aa12.6□□□□□ -0.39
USHBP1-206ENST00000596436 TSSC4Q9Y5U2 329 aaPredicted RBP12.6□□□□□ -0.39
USHBP1-206ENST00000596436 HPGDSO60760 199 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 PROP1O75360 226 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 DIRAS3O95661 229 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 LPLP06858 475 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 CD1BP29016 333 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 TMBIM6P55061 237 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 ARSJQ5FYB0 599 aaPredicted RBP12.59□□□□□ -0.39
USHBP1-206ENST00000596436 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 OR10J5Q8NHC4 309 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 RAB2BQ8WUD1 216 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 ACOT12Q8WYK0 555 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 PIPOXQ9P0Z9 390 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 SCOCQ9UIL1 159 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 MOB4Q9Y3A3 225 aa12.59□□□□□ -0.39
USHBP1-206ENST00000596436 MEIS3P1A6NDR6 274 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 RAB29O14966 203 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 APOA1P02647 267 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-206ENST00000596436 ELK1P19419 428 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 ABCA11PQ4W5N1 156 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 FAM71F2Q6NXP2 309 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 H1FOOQ8IZA3 346 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-206ENST00000596436 C5orf56Q8N8D9 126 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 OR2T10Q8NGZ9 312 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 AKR1E2Q96JD6 320 aa12.58□□□□□ -0.4
USHBP1-206ENST00000596436 TCRBV4S1A1TA0A5B7 111 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 H3BMQ9 156 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 MOSP00540 346 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 PF4P02776 101 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 FCER2P06734 321 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
USHBP1-206ENST00000596436 HOGA1Q86XE5 327 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 DYNC2LI1Q8TCX1 351 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 ISOC1Q96CN7 298 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 CMTM3Q96MX0 182 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 B9D2Q9BPU9 175 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 BCL7BQ9BQE9 202 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 GINS4Q9BRT9 223 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 PLSCR3Q9NRY6 295 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 CEPT1Q9Y6K0 416 aa12.57□□□□□ -0.4
USHBP1-206ENST00000596436 HLA-DQB1P01920 261 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 OR8U9P0C7N5 309 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 GPR12P47775 334 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 LINC00205P59089 165 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 GLDNQ6ZMI3 551 aaPredicted RBP12.56□□□□□ -0.4
USHBP1-206ENST00000596436 Q8N9W7 124 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 BEST4Q8NFU0 473 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 OR4X2Q8NGF9 303 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 OR8U1Q8NH10 309 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 AP3S1Q92572 193 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 RITA1Q96K30 269 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 S1PR3Q99500 378 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 OR2D2Q9H210 308 aa12.56□□□□□ -0.4
USHBP1-206ENST00000596436 M0QZK8 103 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 FGF16O43320 207 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
USHBP1-206ENST00000596436 F2RL1P55085 397 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 ETV3LQ6ZN32 361 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 DRAXINQ8NBI3 349 aaPredicted RBP12.55□□□□□ -0.4
USHBP1-206ENST00000596436 WWC2-AS2Q96NR7 200 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 MIXL1Q9H2W2 232 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 GHITMQ9H3K2 345 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
USHBP1-206ENST00000596436 ZNF221Q9UK13 617 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms