RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 IFNA2P01563 188 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 CD34P28906 385 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 DHRS2Q13268 280 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 C1orf122Q6ZSJ8 110 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 KCTD9Q7L273 389 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 TBC1D26Q86UD7 250 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 LYG1Q8N1E2 194 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 DRAM1Q8N682 238 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 KIR3DL3Q8N743 410 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF439Q8NDP4 499 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 OR9G1Q8NH87 305 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 COQ8AQ8NI60 647 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 ARID1AO14497 2285 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 A0A087X0M5 115 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 C3orf85A0A1B0GTC6 90 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 A0A1B0GX30 115 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 J3QR06 171 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 RAB29O14966 203 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 PFDN1O60925 122 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 DUS4LO95620 317 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF16P17020 682 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 PRTN3P24158 256 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 DVL1P1P54792 670 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 RRAS2P62070 204 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 UTF1Q5T230 341 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 SLC25A48Q6ZT89 311 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 C8orf31Q8N9H6 132 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 OR13D1Q8NGV5 346 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 PHB2Q99623 299 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 AGMATQ9BSE5 352 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 METTL8Q9H825 291 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 HEXA-AS1Q9H8Q6 139 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 LPAR2Q9HBW0 351 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 MMP26Q9NRE1 261 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 SDHAF2Q9NX18 166 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 POLR3KQ9Y2Y1 108 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 KPTNQ9Y664 436 aa10.67□□□□□ -0.7
SHKBP1-209ENST00000595803 A0A0B4J2A0 478 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 IGLV2-14P01704 120 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 TRAPPC2P0DI81 140 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 TRAPPC2BP0DI82 140 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 COX7A1P24310 79 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 IL3RAP26951 378 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 SUPT4H1P63272 117 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 CATR1Q13166 79 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 FCN2Q15485 313 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 SP6Q3SY56 376 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF66Q6ZN08 573 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 Q8N7P7 452 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 OR10X1Q8NGY0 326 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 CHAC2Q8WUX2 184 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 MITD1Q8WV92 249 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 TNFRSF14Q92956 283 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 S1PR3Q99500 378 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 HSD17B10Q99714 261 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 CLEC7AQ9BXN2 247 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 REG4Q9BYZ8 158 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 SHPKQ9UHJ6 478 aa10.66□□□□□ -0.7
SHKBP1-209ENST00000595803 IGHV2-26A0A0B4J1V2 119 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 B4DSR2 109 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 RNF223E7ERA6 249 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 M0R1X1 148 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 B3GALNT1O75752 331 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 TOX4O94842 621 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 OR5AC1P0C628 307 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 F2RP25116 425 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 PAX2Q02962 417 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 LOXL1Q08397 574 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 LIN54Q6MZP7 749 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 LGI3Q8N145 548 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 PNKDQ8N490 385 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 OR51H1Q8NH63 302 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF596Q8TC21 504 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 GALNT14Q96FL9 552 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 GPHA2Q96T91 129 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 SIRT7Q9NRC8 400 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 INSIG2Q9Y5U4 225 aa10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 ANK3Q12955 4377 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-209ENST00000595803 MSMBP08118 114 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 SRPXP78539 464 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 TMEM187Q14656 261 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 RPL39P5Q59GN2 51 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 VMO1Q7Z5L0 202 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF695Q8IW36 515 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 LINC01356Q8N9X3 169 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 TMEM186Q96B77 213 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 C1orf159Q96HA4 380 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 TP53RKQ96S44 253 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 PCGF1Q9BSM1 259 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 SIRPDQ9H106 197 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 MGAT4CQ9UBM8 478 aa10.64□□□□□ -0.71
SHKBP1-209ENST00000595803 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 H0Y980 276 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms