RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 LFNGQ8NES3 379 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 THAP7Q9BT49 309 aaPredicted RBP8.16□□□□□ -1.1
USE1-203ENST00000593597 TMEM59Q9BXS4 323 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
USE1-203ENST00000593597 PLCXD1Q9NUJ7 323 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 METTL1Q9UBP6 276 aaKnown RBP8.16□□□□□ -1.1
USE1-203ENST00000593597 GHRLQ9UBU3 117 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 WASHC3Q9Y3C0 194 aa8.16□□□□□ -1.1
USE1-203ENST00000593597 ITGB1BP1O14713 200 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 MYL12BO14950 172 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 IGLV2-23P01705 113 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 HSPB1P04792 205 aaKnown RBP8.15□□□□□ -1.1
USE1-203ENST00000593597 SCTP09683 121 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 OR8U9P0C7N5 309 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 TMEM50BP56557 158 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 TPPP2P59282 170 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 HLA-DRB3P79483 266 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 PJVKQ0ZLH3 352 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 PLA2G7Q13093 441 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 AKIRIN2Q53H80 203 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 ACTBL2Q562R1 376 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 RBM48Q5RL73 367 aaKnown RBP8.15□□□□□ -1.1
USE1-203ENST00000593597 DHRSXQ8N5I4 330 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 TCTEX1D1Q8N7M0 179 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 SETD9Q8NE22 299 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 OR6Q1Q8NGQ2 317 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 NEDD4LQ96PU5 975 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 CHCHD3Q9NX63 227 aaKnown RBP8.15□□□□□ -1.1
USE1-203ENST00000593597 PIPOXQ9P0Z9 390 aa8.15□□□□□ -1.1
USE1-203ENST00000593597 TRBV12-3P01733 135 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 CRYGBP07316 175 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 UBBP0CG47 229 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 LYL1P12980 280 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 MAPK3P27361 379 aaPredicted RBP8.14□□□□□ -1.11
USE1-203ENST00000593597 PITPNAQ00169 270 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 MED21Q13503 144 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 TMEM91Q6ZNR0 172 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 FAM89BQ8N5H3 189 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 PACRGLQ8N7B6 248 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 BPIFB6Q8NFQ5 453 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 SETD6Q8TBK2 473 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 ABHD5Q8WTS1 349 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 TMED9Q9BVK6 235 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 ABRACLQ9P1F3 81 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 STEAP1Q9UHE8 339 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 LRRC42Q9Y546 428 aa8.14□□□□□ -1.11
USE1-203ENST00000593597 A8MZ25 164 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 H7C2Y5 167 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 HSPA12AO43301 675 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 SLC25A17O43808 307 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 RBBP9O75884 186 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 TRGV3P03979 118 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 CDK1P06493 297 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 GSTP1P09211 210 aaKnown RBP8.13□□□□□ -1.11
USE1-203ENST00000593597 CD3GP09693 182 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 UCHL1P09936 223 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 CEACAM6P40199 344 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 PLGLAQ15195 96 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 P2RY14Q15391 338 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 PLAC9Q5JTB6 97 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 OGFRL1Q5TC84 451 aaPredicted RBP8.13□□□□□ -1.11
USE1-203ENST00000593597 GLT8D1Q68CQ7 371 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 PYHIN1Q6K0P9 492 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 ADAMTSL5Q6ZMM2 481 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 MOB1BQ7L9L4 216 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 C10orf67Q8IYJ2 551 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 C8orf59Q8N0T1 100 aaPredicted RBP8.13□□□□□ -1.11
USE1-203ENST00000593597 GRPEL2Q8TAA5 225 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 KCNG3Q8TAE7 436 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 PHYHIPQ92561 330 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 PTX4Q96A99 478 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 CHMP1AQ9HD42 196 aaPredicted RBP8.13□□□□□ -1.11
USE1-203ENST00000593597 Q9N2K0 584 aa8.13□□□□□ -1.11
USE1-203ENST00000593597 ANKRD34BA5PLL1 514 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 IZUMO1RA6ND01 250 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 SRRM4A7MD48 611 aaKnown RBP8.12□□□□□ -1.11
USE1-203ENST00000593597 LDLRAD4O15165 306 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 SPDEFO95238 335 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 BPNT1O95861 308 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 TFAP2AP05549 437 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 SRMP19623 302 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 MC5RP33032 325 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 CLDN12P56749 244 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 RPS25P62851 125 aaKnown RBP8.12□□□□□ -1.11
USE1-203ENST00000593597 DYRK1AQ13627 763 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 KLF5Q13887 457 aaPredicted RBP8.12□□□□□ -1.11
USE1-203ENST00000593597 IRF3Q14653 427 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 FXYD3Q14802 87 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 RCN1Q15293 331 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 RNLSQ5VYX0 342 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 CEACAM19Q7Z692 300 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 POC5Q8NA72 575 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 OR5T1Q8NG75 326 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 OR6M1Q8NGM8 313 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 THRSPQ92748 146 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms