RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RIMS4Q9H426 269 aaPredicted RBP15.81■□□□□ 0.12
TRIM47-207ENST00000593089 TPSG1Q9NRR2 321 aa15.81■□□□□ 0.12
TRIM47-207ENST00000593089 METTL1Q9UBP6 276 aaKnown RBP15.81■□□□□ 0.12
TRIM47-207ENST00000593089 RNF150Q9ULK6 438 aa15.81■□□□□ 0.12
TRIM47-207ENST00000593089 TRBV6-6A0A0A6YYG2 114 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 ITGB1BP1O14713 200 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 CASQ2O14958 399 aaPredicted RBP15.8■□□□□ 0.12
TRIM47-207ENST00000593089 RBBP9O75884 186 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 UCHL1P09936 223 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 CD37P11049 281 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 SNRPBP14678 240 aaKnown RBP15.8■□□□□ 0.12
TRIM47-207ENST00000593089 ZBTB25P24278 435 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 ACTBL2Q562R1 376 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 LIPKQ5VXJ0 399 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 CD200R1LQ6Q8B3 271 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 OVCH2Q7RTZ1 564 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 SBSPONQ8IVN8 264 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 EDARADDQ8WWZ3 215 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 ARPC1AQ92747 370 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 TMEM203Q969S6 136 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 URM1Q9BTM9 101 aaKnown RBP15.8■□□□□ 0.12
TRIM47-207ENST00000593089 GHITMQ9H3K2 345 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 PLGRKTQ9HBL7 147 aa15.8■□□□□ 0.12
TRIM47-207ENST00000593089 C3orf84H3BNL1 204 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 CA2P00918 260 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 SCTP09683 121 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 GP9P14770 177 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 ARSBP15848 533 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 CPEP16870 476 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 TPPP2P59282 170 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 PSG5Q15238 335 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 PYHIN1Q6K0P9 492 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 ACSM6Q6P461 480 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 LFNGQ8NES3 379 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 GFI1Q99684 422 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 RNF5Q99942 180 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 VCXQ9H320 206 aa15.79■□□□□ 0.12
TRIM47-207ENST00000593089 PROP1O75360 226 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 HSPB1P04792 205 aaKnown RBP15.78■□□□□ 0.12
TRIM47-207ENST00000593089 LINC00205P59089 165 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 PITPNAQ00169 270 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 AKIRIN2Q53H80 203 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 OR6Q1Q8NGQ2 317 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 UFD1Q92890 307 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 Q9N2K0 584 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 SCN3BQ9NY72 215 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 MGAT4AQ9UM21 535 aa15.78■□□□□ 0.12
TRIM47-207ENST00000593089 AK6Q9Y3D8 172 aaKnown RBP15.78■□□□□ 0.12
TRIM47-207ENST00000593089 SLC17A2O00624 439 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 IGKV1-16P04430 117 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 OR8U9P0C7N5 309 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 CD40LGP29965 261 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 VEGFCP49767 419 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 RPS16P62249 146 aaKnown RBP15.77■□□□□ 0.12
TRIM47-207ENST00000593089 ZNF562Q6V9R5 426 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 FAM89BQ8N5H3 189 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 ZNF383Q8NA42 475 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 FLYWCH2Q96CP2 140 aaKnown RBP15.77■□□□□ 0.12
TRIM47-207ENST00000593089 ARHGAP5-AS1Q96IT6 56 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 RCHY1Q96PM5 261 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 C12orf4Q9NQ89 552 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 ZNF221Q9UK13 617 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 HSF4Q9ULV5 492 aa15.77■□□□□ 0.12
TRIM47-207ENST00000593089 STAB2Q8WWQ8 2551 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 TRIM64CA6NLI5 447 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 FOXI3A8MTJ6 420 aaPredicted RBP15.76■□□□□ 0.11
TRIM47-207ENST00000593089 TRGV3P03979 118 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 FRMD6-AS1P0C7T7 363 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 HSMCR30P0CW71 290 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 TMEM50BP56557 158 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 RPS25P62851 125 aaKnown RBP15.76■□□□□ 0.11
TRIM47-207ENST00000593089 IRF3Q14653 427 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 RAB11BQ15907 218 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 TMEM91Q6ZNR0 172 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 PTX4Q96A99 478 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 RHOVQ96L33 236 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 OR4C12Q96R67 309 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 TSNAXQ99598 290 aaKnown RBP15.76■□□□□ 0.11
TRIM47-207ENST00000593089 CMSS1Q9BQ75 279 aaKnown RBP15.76■□□□□ 0.11
TRIM47-207ENST00000593089 PECRQ9BY49 303 aa15.76■□□□□ 0.11
TRIM47-207ENST00000593089 IGKV1-6A0A0C4DH72 117 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 SPDEFO95238 335 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 APOA2P02652 100 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 TFAP2AP05549 437 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 CLDN12P56749 244 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 SRSF7Q16629 238 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRIM47-207ENST00000593089 HAPLN4Q86UW8 402 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 GRPEL2Q8TAA5 225 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 SLA2Q9H6Q3 261 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 ZNF355PQ9NSJ1 428 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 RDH8Q9NYR8 311 aa15.75■□□□□ 0.11
TRIM47-207ENST00000593089 M0R1X1 148 aa15.74■□□□□ 0.11
TRIM47-207ENST00000593089 ARPC1BO15143 372 aaKnown RBP15.74■□□□□ 0.11
TRIM47-207ENST00000593089 SLC25A17O43808 307 aa15.74■□□□□ 0.11
TRIM47-207ENST00000593089 FXYD3Q14802 87 aa15.74■□□□□ 0.11
TRIM47-207ENST00000593089 PDPNQ86YL7 162 aa15.74■□□□□ 0.11
TRIM47-207ENST00000593089 MUC7Q8TAX7 377 aa15.74■□□□□ 0.11
TRIM47-207ENST00000593089 TRDCB7Z8K6 153 aa15.73■□□□□ 0.11
TRIM47-207ENST00000593089 ARL6IP5O75915 188 aa15.73■□□□□ 0.11
TRIM47-207ENST00000593089 TPBGQ13641 420 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms