RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	LINC00205	P59089	165 aa		13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	OR10K2	Q6IF99	312 aa		13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	C6orf201	Q7Z4U5	140 aa		13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	PACRGL	Q8N7B6	248 aa		13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	RANGRF	Q9HD47	186 aa	Predicted RBP	13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	LRRC42	Q9Y546	428 aa		13.92	□□□□□ -0.18
CIRBP-238	ENST00000592412	PNMA8C	A0A1B0GUJ8	204 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412		H7C2Y5	167 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	RBBP9	O75884	186 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	GSTP1	P09211	210 aa	Known RBP	13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	MC5R	P33032	325 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	POC5	Q8NA72	575 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	OR9G4	Q8NGQ1	327 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	RNF5	Q99942	180 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	UQCC2	Q9BRT2	126 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	STEAP1	Q9UHE8	339 aa		13.91	□□□□□ -0.18
CIRBP-238	ENST00000592412	ANKRD34B	A5PLL1	514 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	IZUMO1R	A6ND01	250 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	CASQ2	O14958	399 aa	Predicted RBP	13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	MYL12A	P19105	171 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	ZP3	P21754	424 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	HTR2C	P28335	458 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	DEFA5	Q01523	94 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	NICN1	Q9BSH3	213 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	KCNK15	Q9H427	330 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	ABRACL	Q9P1F3	81 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	OR1A1	Q9P1Q5	309 aa		13.9	□□□□□ -0.18
CIRBP-238	ENST00000592412	ITGB1BP1	O14713	200 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	TRBV12-3	P01733	135 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	CSN3	P07498	182 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	SYNJ2BP	P57105	145 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	RPS27A	P62979	156 aa	Known RBP	13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	NKAIN3	Q8N8D7	197 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	ZNF383	Q8NA42	475 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	OR5T1	Q8NG75	326 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	GRPEL2	Q8TAA5	225 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	CYGB	Q8WWM9	190 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	TMEM80	Q96HE8	168 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	NEDD4L	Q96PU5	975 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	GHRL	Q9UBU3	117 aa		13.89	□□□□□ -0.19
CIRBP-238	ENST00000592412	DNAH10	Q8IVF4	4471 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412		A0A0A6YYD4	124 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412		H3BUA1	57 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	SLC22A1	O15245	554 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	RBMXL2	O75526	392 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	JTB	O76095	146 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	SPDEF	O95238	335 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	IFNA6	P05013	189 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	CD40LG	P29965	261 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	PJVK	Q0ZLH3	352 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	UNC119	Q13432	240 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	INSL4	Q14641	139 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	FXYD3	Q14802	87 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	TTC23	Q5W5X9	447 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	FAM110A	Q9BQ89	295 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	TMED9	Q9BVK6	235 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	KRTAP17-1	Q9BYP8	105 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	HIPK2	Q9H2X6	1198 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	KMT2A	Q03164	3969 aa		13.88	□□□□□ -0.19
CIRBP-238	ENST00000592412	C13orf42	A0A1B0GVH6	325 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	IRGM	A1A4Y4	181 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412		H0Y980	276 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	SLC25A17	O43808	307 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	MECP2	P51608	486 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	DHRSX	Q8N5I4	330 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	GGH	Q92820	318 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	TM2D1	Q9BX74	207 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	VCX	Q9H320	206 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	ZNF355P	Q9NSJ1	428 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	SIGLEC8	Q9NYZ4	499 aa		13.87	□□□□□ -0.19
CIRBP-238	ENST00000592412	HERC2	O95714	4834 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	IGLV2-23	P01705	113 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	CPE	P16870	476 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	CEL	P19835	753 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	RPS16	P62249	146 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	QRFP	P83859	136 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	DYRK1A	Q13627	763 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	LRRTM1	Q86UE6	522 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	TSNAX	Q99598	290 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	TUBA4B	Q9H853	241 aa		13.86	□□□□□ -0.19
CIRBP-238	ENST00000592412	TRBV6-6	A0A0A6YYG2	114 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412		A0A0G2JLM5	398 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	BRI3	O95415	125 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	CD1A	P06126	327 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	CRYGB	P07316	175 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	UBB	P0CG47	229 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	CEACAM6	P40199	344 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	TAS2R43	P59537	309 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	HLA-DRB3	P79483	266 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	ST3GAL4	Q11206	333 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	MRGPRG-AS1	Q2M3A8	158 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	MOGAT2	Q3SYC2	334 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	C1orf100	Q5SVJ3	147 aa		13.85	□□□□□ -0.19
CIRBP-238	ENST00000592412	ZNF343	Q6P1L6	599 aa		13.85	□□□□□ -0.19

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