RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TRBV5-5A0A0J9YX44 114 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 OR2T8A6NH00 312 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 HSBP1L1C9JCN9 74 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF205O95201 554 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 IGHV1-69P01742 117 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 GIPP09681 153 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 RIPPLY3P57055 190 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 EGR4Q05215 589 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 HLA-DRB5Q30154 266 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 C8orf82Q6P1X6 216 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 CCBE1Q6UXH8 406 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 DTD1Q8TEA8 209 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 TXNDC17Q9BRA2 123 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 ISG20L2Q9H9L3 353 aaKnown RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 NRN1Q9NPD7 142 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 PPP1R2P9O14990 202 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 RBFOX2O43251 390 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 SLC25A6P12236 298 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 POLR2IP36954 125 aaKnown RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 KLF9Q13886 244 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 HEPN1Q6WQI6 88 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 FAM122BQ7Z309 247 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 BPIFA4PQ86YQ2 179 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 ZNRF4Q8WWF5 429 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 NIPSNAP3BQ9BS92 247 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 KCNE5Q9UJ90 142 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 VWA8A3KMH1 1905 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 C20orf202A1L168 122 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 RAB19A4D1S5 217 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 FAM90A9PA6NNJ1 464 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 SYNGR2O43760 224 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 TNFSF13O75888 250 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 IGKV1D-33P01593 117 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 IGKV1-33P01594 117 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 PSG2P11465 335 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 PSMB6P28072 239 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 B2MP61769 119 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 FABP5Q01469 135 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 RPL7L1Q6DKI1 246 aaKnown RBP5.3□□□□□ -1.56
SMAD4-212ENST00000591126 FOXL2NBQ6ZUU3 175 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 OR52I2Q8NH67 350 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 SGMS2Q8NHU3 365 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 H3BUA1 57 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 TNFSF12O43508 249 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 MAGEB1P43366 347 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 RPS20P60866 119 aaKnown RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 CD83Q01151 205 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 SLC38A11Q08AI6 406 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 AANATQ16613 207 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 COX19Q49B96 90 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 PRR30Q53SZ7 412 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 C10orf113Q5VZT2 155 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 SLC24A4Q8NFF2 622 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 HRH4Q9H3N8 390 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 MLXQ9UH92 298 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ELOA3CA0A087WX78 387 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 PQLC2LA1A4F0 135 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ITGB1BP1O14713 200 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 HLA-GP17693 338 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 APOC4P55056 127 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 VAX1Q5SQQ9 334 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 TEPPQ6URK8 271 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 SHISA2Q6UWI4 295 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 VMO1Q7Z5L0 202 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 DYRK2Q92630 601 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 RHOVQ96L33 236 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF331Q9NQX6 463 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 NPIPB6E9PJ23 425 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 SSSCA1O60232 199 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ELANEP08246 267 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF14P17017 642 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 DESI1Q6ICB0 168 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 DGAT2L7PQ6IED9 249 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF826PQ6ZT77 177 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 OR4D11Q8NGI4 311 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 OR2G3Q8NGZ4 309 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 RNASEH2CQ8TDP1 164 aaKnown RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 CACNG5Q9UF02 275 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 RALGAPA1Q6GYQ0 2036 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 COL4A4P53420 1690 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 TRAV41A0A0B4J266 112 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 TGOLN2O43493 480 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 CD5LO43866 347 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 RD3LP0DJH9 198 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 PAX1P15863 534 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 CCL1P22362 96 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 PRSS12P56730 875 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 SRSF6Q13247 344 aaKnown RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 NHLRC3Q5JS37 347 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 BEND2Q8NDZ0 799 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 DVL3Q92997 716 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 SPSB4Q96A44 273 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF430Q9H8G1 570 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-212ENST00000591126 NPVFQ9HCQ7 196 aa5.29□□□□□ -1.56
SMAD4-212ENST00000591126 ADAM11O75078 769 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 MT-ND4LP03901 98 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 FCGR3AP08637 254 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 KLK2P20151 261 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 NSUN5P1Q3KNT7 163 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms