RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TNFAIP8O95379 198 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 OPN1MWP04001 364 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 CD3GP09693 182 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 OPN1MW2P0DN77 364 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 OPN1MW3P0DN78 364 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 ZBTB25P24278 435 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 GPR12P47775 334 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 F2RL1P55085 397 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 NSUN5P1Q3KNT7 163 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 CENPVQ7Z7K6 275 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-211ENST00000590499 TSPAN14Q8NG11 270 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 OR4A4PQ8NGN8 299 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 LGALS14Q8TCE9 139 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 YIPF6Q96EC8 236 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 S1PR3Q99500 378 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 CABLES2Q9BTV7 478 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 C11orf54Q9H0W9 315 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-211ENST00000590499 ABCG5Q9H222 651 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 PIPOXQ9P0Z9 390 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 DAPK2Q9UIK4 370 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 ELF5Q9UKW6 265 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-211ENST00000590499 A0A075B6Q4 140 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 A0A087WXM4 84 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 LINC01548A6NM66 108 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 NCBP2LA6PVI3 153 aaKnown RBP8.83□□□□□ -1
SMAD4-211ENST00000590499 FABP7O15540 132 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 PROP1O75360 226 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 DIRAS3O95661 229 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 CEACAM6P40199 344 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 SCAND1P57086 179 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 MXD1Q05195 221 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 SRSF7Q16629 238 aaKnown RBP eCLIP8.83□□□□□ -1
SMAD4-211ENST00000590499 RPL39P5Q59GN2 51 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 Q6ZS49 121 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 SLC35E3Q7Z769 313 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 CHPT1Q8WUD6 406 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 SLC25A38Q96DW6 304 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 ABHD14BQ96IU4 210 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 RITA1Q96K30 269 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 NOL4LQ96MY1 436 aaPredicted RBP8.83□□□□□ -1
SMAD4-211ENST00000590499 ATG5Q9H1Y0 275 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 GHITMQ9H3K2 345 aa8.83□□□□□ -1
SMAD4-211ENST00000590499 IGKV1D-8A0A087WSZ0 117 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 TRBV6-7A0A0A0MS04 114 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 PSMB11A5LHX3 300 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 HSPA12AO43301 675 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 GSTT2P0CG29 244 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 GSTT2BP0CG30 244 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 CT45A6P0DMU7 189 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 CT45A5P0DMU8 189 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 CT45A7P0DMV0 189 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 SERPINB10P48595 397 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 ACTBP60709 375 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 KIR2DS1Q14954 304 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 ARL6IP1Q15041 203 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 IGSF11Q5DX21 431 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 FAM131AQ6UXB0 335 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 ZNF329Q86UD4 541 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 STPG2Q8N412 459 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 OR4X2Q8NGF9 303 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 OR5H6Q8NGV6 325 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 MAFIPQ8WZ33 124 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 HSPB9Q9BQS6 159 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 RHBDL2Q9NX52 303 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 RDH8Q9NYR8 311 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 ZNF230Q9UIE0 474 aaPredicted RBP8.82□□□□□ -1
SMAD4-211ENST00000590499 ZNF580Q9UK33 172 aa8.82□□□□□ -1
SMAD4-211ENST00000590499 TGP01266 2768 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 TCRBV4S1A1TA0A5B7 111 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 OR5H14A6NHG9 310 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 H0YJW9 148 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 KCNAB3O43448 404 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 NDUFA3O95167 84 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 DTYMKP23919 212 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 CNTFRP26992 372 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 TGFBR1P36897 503 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 MRPS15P82914 257 aaKnown RBP8.81□□□□□ -1
SMAD4-211ENST00000590499 CFHR3Q02985 330 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 MMDQ15546 238 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 TIMM50Q3ZCQ8 353 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 ZNF260Q3ZCT1 412 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 CDNFQ49AH0 187 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 HACD4Q5VWC8 232 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 FOXRED2Q8IWF2 684 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 NPBQ8NG41 125 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 OR4F17Q8NGA8 305 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 OR5AN1Q8NGI8 311 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 R3HDM4Q96D70 268 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 OR4F4Q96R69 305 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 RASL11BQ9BPW5 248 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 VCX3AQ9NNX9 186 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 TSSC4Q9Y5U2 329 aaPredicted RBP8.81□□□□□ -1
SMAD4-211ENST00000590499 ETV7Q9Y603 341 aa8.81□□□□□ -1
SMAD4-211ENST00000590499 A0A1W2PRX2 142 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 TMEM235A6NFC5 223 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 AP4M1O00189 453 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 NBR2O15453 112 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 AIREO43918 545 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 SSX5O60225 188 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms