RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SSR3Q9UNL2 185 aa11.33□□□□□ -0.6
DDX39A-208ENST00000588692 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.6
DDX39A-208ENST00000588692 IGKV1-6A0A0C4DH72 117 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 H0YJW9 148 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 RPLP1P05386 114 aaKnown RBP11.32□□□□□ -0.6
DDX39A-208ENST00000588692 CNTFRP26992 372 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 LIN54Q6MZP7 749 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-208ENST00000588692 OR8U1Q8NH10 309 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 RITA1Q96K30 269 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 RNF5Q99942 180 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 CABLES2Q9BTV7 478 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 AURKAIP1Q9NWT8 199 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-208ENST00000588692 RDH8Q9NYR8 311 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 H7C2Y5 167 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 SCGNO76038 276 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 PRB2P02812 416 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-208ENST00000588692 GNB3P16520 340 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 PSMB8P28062 276 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 SRSF7Q16629 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX39A-208ENST00000588692 OR10J5Q8NHC4 309 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 DPF1Q92782 380 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX39A-208ENST00000588692 PARP11Q9NR21 331 aa11.32□□□□□ -0.6
DDX39A-208ENST00000588692 A0A075B6Q4 140 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 TRBV6-7A0A0A0MS04 114 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 A0A0B4J203 849 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 RRHO14718 337 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 TFAP2AP05549 437 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 GSTP1P09211 210 aaKnown RBP11.31□□□□□ -0.6
DDX39A-208ENST00000588692 PPIFP30405 207 aaKnown RBP11.31□□□□□ -0.6
DDX39A-208ENST00000588692 ARFRP1Q13795 201 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 ZNF660Q6AZW8 331 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-208ENST00000588692 GLDNQ6ZMI3 551 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-208ENST00000588692 Q6ZS49 121 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 MRAPQ8TCY5 172 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 MYOZ3Q8TDC0 251 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
DDX39A-208ENST00000588692 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 CCL24O00175 119 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 BET1O15155 118 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 PROP1O75360 226 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 SPDEFO95238 335 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 APOA2P02652 100 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 DTYMKP23919 212 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 TALDO1P37837 337 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-208ENST00000588692 PLGLAQ15195 96 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 TMEM65Q6PI78 240 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 LCNL1Q6ZST4 164 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 C4orf3Q8WVX3 66 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
DDX39A-208ENST00000588692 SMIM30A4D0T7 59 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 IGLV1-40P01703 118 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 GSTT2P0CG29 244 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 GSTT2BP0CG30 244 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 SCAND1P57086 179 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 EGFEM1PQ0D2K5 195 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 IGSF11Q5DX21 431 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 SFXN4Q6P4A7 337 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 TCTEX1D1Q8N7M0 179 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 ZNF383Q8NA42 475 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 TSNAXQ99598 290 aaKnown RBP11.29□□□□□ -0.6
DDX39A-208ENST00000588692 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
DDX39A-208ENST00000588692 G3V318 75 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 M0R1X1 148 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 DRAXINQ8NBI3 349 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-208ENST00000588692 MINDY2Q8NBR6 621 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 GINS4Q9BRT9 223 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 OR51E2Q9H255 320 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
DDX39A-208ENST00000588692 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-208ENST00000588692 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 DNAH3Q8TD57 4116 aa11.28□□□□□ -0.6
DDX39A-208ENST00000588692 IGKV1-16P04430 117 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 OR8U9P0C7N5 309 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 SDC2P34741 201 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 CX3CL1P78423 397 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 PITPNAQ00169 270 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 NDPQ00604 133 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.6
DDX39A-208ENST00000588692 TMEM267Q0VDI3 215 aaPredicted RBP11.27□□□□□ -0.6
DDX39A-208ENST00000588692 FHL3Q13643 280 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 PSG5Q15238 335 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 NEDD8Q15843 81 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 DEFB136Q30KP8 78 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 CDNFQ49AH0 187 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 HACD4Q5VWC8 232 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms