RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
TRIM47-203ENST00000586495 GLDNQ6ZMI3 551 aaPredicted RBP13.22□□□□□ -0.29
TRIM47-203ENST00000586495 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
TRIM47-203ENST00000586495 OR5AN1Q8NGI8 311 aa13.22□□□□□ -0.29
TRIM47-203ENST00000586495 PTX4Q96A99 478 aa13.22□□□□□ -0.29
TRIM47-203ENST00000586495 PARP12Q9H0J9 701 aaKnown RBP13.22□□□□□ -0.29
TRIM47-203ENST00000586495 ZNF221Q9UK13 617 aa13.22□□□□□ -0.29
TRIM47-203ENST00000586495 RAB22AQ9UL26 194 aa13.22□□□□□ -0.29
TRIM47-203ENST00000586495 RNF150Q9ULK6 438 aa13.22□□□□□ -0.29
TRIM47-203ENST00000586495 TRDCB7Z8K6 153 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 I3L521 148 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 LUMP51884 338 aaPredicted RBP13.21□□□□□ -0.29
TRIM47-203ENST00000586495 CRIP2P52943 208 aaPredicted RBP13.21□□□□□ -0.29
TRIM47-203ENST00000586495 CX3CL1P78423 397 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 ZNF616Q08AN1 781 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 KIAA0141Q14154 515 aaPredicted RBP13.21□□□□□ -0.29
TRIM47-203ENST00000586495 TBCEQ15813 527 aaPredicted RBP13.21□□□□□ -0.29
TRIM47-203ENST00000586495 ECSCRQ19T08 205 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 ZNF367Q7RTV3 350 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 OR1N2Q8NGR9 330 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 GNB4Q9HAV0 340 aa13.21□□□□□ -0.29
TRIM47-203ENST00000586495 A0A1W2PN81 502 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 LDLRAD4O15165 306 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 CD3GP09693 182 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 CHRNA7P36544 502 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 SERPINB10P48595 397 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 INSL3P51460 131 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 ZNF260Q3ZCT1 412 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 HES5Q5TA89 166 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 IZUMO2Q6UXV1 221 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 ABHD5Q8WTS1 349 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 CNBD2Q96M20 576 aa13.2□□□□□ -0.3
TRIM47-203ENST00000586495 FOXA2Q9Y261 457 aaPredicted RBP13.2□□□□□ -0.3
TRIM47-203ENST00000586495 TMEM272A0A1B0GTI8 110 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 APOA2P02652 100 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 MYL9P24844 172 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 ECI1P42126 302 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 RPS16P62249 146 aaKnown RBP13.19□□□□□ -0.3
TRIM47-203ENST00000586495 NDPQ00604 133 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 PLAC9Q5JTB6 97 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 PYHIN1Q6K0P9 492 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 OR4A4PQ8NGN8 299 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 RAB3CQ96E17 227 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 TSNAXQ99598 290 aaKnown RBP13.19□□□□□ -0.3
TRIM47-203ENST00000586495 RDH8Q9NYR8 311 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 NUBP2Q9Y5Y2 271 aa13.19□□□□□ -0.3
TRIM47-203ENST00000586495 TRAV1-2A0A0B4J238 106 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 SPDEFO95238 335 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 TFAP2AP05549 437 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 GADD45AP24522 165 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 CD40LGP29965 261 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 GNB1P62873 340 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 PSG5Q15238 335 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 C11orf87Q6NUJ2 197 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 ZNF562Q6V9R5 426 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 PDPNQ86YL7 162 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 DRAXINQ8NBI3 349 aaPredicted RBP13.18□□□□□ -0.3
TRIM47-203ENST00000586495 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.18□□□□□ -0.3
TRIM47-203ENST00000586495 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 METTL1Q9UBP6 276 aaKnown RBP13.18□□□□□ -0.3
TRIM47-203ENST00000586495 SCOCQ9UIL1 159 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 FBXO7Q9Y3I1 522 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 A3GALT2U3KPV4 340 aa13.18□□□□□ -0.3
TRIM47-203ENST00000586495 IGKV1-6A0A0C4DH72 117 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 FCN1O00602 326 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 FABP7O15540 132 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 PROP1O75360 226 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 SSX1Q16384 188 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 PPP1R27Q86WC6 154 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 ZNF383Q8NA42 475 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 OR10R2Q8NGX6 335 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 PRR25Q96S07 402 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
TRIM47-203ENST00000586495 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM47-203ENST00000586495 TRDV1A0A1B0GX56 115 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 IFITM5A6NNB3 132 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 LINC01619G3V211 115 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 M0R1X1 148 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 OVOL1O14753 267 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 BET1O15155 118 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 SOX15O60248 233 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 DIRAS3O95661 229 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 FCGR3AP08637 254 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
TRIM47-203ENST00000586495 EGR2P11161 476 aaPredicted RBP13.16□□□□□ -0.3
TRIM47-203ENST00000586495 RAB3BP20337 219 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 RAB6AP20340 208 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 GALP22466 123 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 PLA2G7Q13093 441 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
TRIM47-203ENST00000586495 OR10J5Q8NHC4 309 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms