RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 GAB2Q9UQC2 676 aa11.76□□□□□ -0.53
SCAMP4-209ENST00000585335 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
SCAMP4-209ENST00000585335 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 J3QRK9 145 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 M0R1X1 148 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 CD74P04233 296 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 FXYD4P59646 89 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 UBA52P62987 128 aaKnown RBP11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 HES1Q14469 280 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 RPL39P5Q59GN2 51 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 TOMM5Q8N4H5 51 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 OR56B4Q8NH76 319 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 DEDD2Q8WXF8 326 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 WDR12Q9GZL7 423 aaKnown RBP11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 SLC5A7Q9GZV3 580 aa11.75□□□□□ -0.53
SCAMP4-209ENST00000585335 VENTXO95231 258 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 APOA2P02652 100 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 AMY2AP04746 511 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 RNASE1P07998 156 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 CD1BP29016 333 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 S100GP29377 79 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 MC5RP33032 325 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 TAGLNQ01995 201 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 CBX3Q13185 183 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 MSMO1Q15800 293 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 THNSL2Q86YJ6 484 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 MOB3AQ96BX8 217 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 ADTRPQ96IZ2 230 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 AKR1E2Q96JD6 320 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 DUX5Q96PT3 197 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 MRPL20Q9BYC9 149 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 TINAGL1Q9GZM7 467 aaPredicted RBP11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 ESM1Q9NQ30 184 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 AKIP1Q9NQ31 210 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 SDHAF2Q9NX18 166 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 TCF19Q9Y242 345 aa11.74□□□□□ -0.53
SCAMP4-209ENST00000585335 IGKV1D-13A0A0B4J2D9 117 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 OR5H14A6NHG9 310 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 CRYBA1P05813 215 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 IGKV1-13P0DP09 117 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 TMEM11P17152 192 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 ECI1P42126 302 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 THBS3P49746 956 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 RAB13P51153 203 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 RPL15P61313 204 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 LSAMPQ13449 338 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 HABP2Q14520 560 aaPredicted RBP11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 ZNF846Q147U1 533 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 LY6EQ16553 131 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 C16orf82Q7Z2V1 217 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 MFSD4AQ8N468 514 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 ZBTB34Q8NCN2 500 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 OR2T10Q8NGZ9 312 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 ZFAND2BQ8WV99 257 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 CFHR4Q92496 578 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 TRIM63Q969Q1 353 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 HSD17B10Q99714 261 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 PRRT1Q99946 306 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 NABP2Q9BQ15 211 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 ZNF251Q9BRH9 671 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 CHIAQ9BZP6 476 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 SCP2D1Q9UJQ7 156 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
SCAMP4-209ENST00000585335 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 H7C2Y5 167 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 GPR137BO60478 399 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 MOSP00540 346 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 IGKV1D-33P01593 117 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 IGKV1-33P01594 117 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 SNRNP70P08621 437 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 PGAM2P15259 253 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 SCGB2B2Q4G0G5 96 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 ZNF660Q6AZW8 331 aaPredicted RBP11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 C16orf87Q6PH81 154 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 OR4C16Q8NGL9 310 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 PIFOQ8TCI5 191 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 CCDC32Q9BV29 185 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 MCUBQ9NWR8 336 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 PRELID3BQ9Y3B1 194 aa11.72□□□□□ -0.53
SCAMP4-209ENST00000585335 A6NDX4 124 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 FAM90A9PA6NNJ1 464 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 RNF212BA8MTL3 300 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 M0QZK8 103 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 CT45A6P0DMU7 189 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 CT45A5P0DMU8 189 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 CT45A7P0DMV0 189 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 RRASP10301 218 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 CD24P25063 80 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 CD40LGP29965 261 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 PPP5CP53041 499 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 UCP3P55916 312 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 CATR1Q13166 79 aa11.71□□□□□ -0.53
SCAMP4-209ENST00000585335 KLF9Q13886 244 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms