RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 HSPA12AO43301 675 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 RGS11O94810 467 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 GAPDHP04406 335 aaKnown RBP7.97□□□□□ -1.13
GGA3-219ENST00000584550 IL3RAP26951 378 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 HLA-DRB3P79483 266 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 CCDC144NLQ6NUI1 221 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 ZNF880Q6PDB4 577 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 SLC25A48Q6ZT89 311 aaKnown RBP7.97□□□□□ -1.13
GGA3-219ENST00000584550 GPR141Q7Z602 305 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 ZNF554Q86TJ5 538 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 LINC00311Q8N616 119 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 ZNF439Q8NDP4 499 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 OR8U1Q8NH10 309 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 EDA2RQ9HAV5 297 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 OR1A1Q9P1Q5 309 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 SLC23A1Q9UHI7 598 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 JPT1Q9UK76 154 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 HERC2O95714 4834 aa7.97□□□□□ -1.13
GGA3-219ENST00000584550 PLECQ15149 4684 aaKnown RBP7.97□□□□□ -1.13
GGA3-219ENST00000584550 TRAV18A0A075B6X5 111 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 A0A1W2PPI3 338 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 TMEM235A6NFC5 223 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 BET1O15155 118 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 YPEL1O60688 119 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 TFAP2AP05549 437 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 FCGR3AP08637 254 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 FAM106CPP0CH98 169 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 CEACAM6P40199 344 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 RAB7AP51149 207 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 HTD2P86397 168 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 KIR2DS1Q14954 304 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 TEX38Q6PEX7 206 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 CROCCP3Q8IVE0 287 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 STPG2Q8N412 459 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 C8orf31Q8N9H6 132 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 OR2AK2Q8NG84 335 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 SLC25A38Q96DW6 304 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 RBMXL1Q96E39 390 aaKnown RBP7.96□□□□□ -1.14
GGA3-219ENST00000584550 YPEL2Q96QA6 119 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 ABHD14AQ9BUJ0 271 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 ST6GALNAC5Q9BVH7 336 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 MGAT4AQ9UM21 535 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 ETV7Q9Y603 341 aa7.96□□□□□ -1.14
GGA3-219ENST00000584550 IGHV1-3A0A0C4DH29 117 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 FABP7O15540 132 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 SCGNO76038 276 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 IGKV1D-33P01593 117 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 IGKV1-33P01594 117 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 GSTT2P0CG29 244 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 GSTT2BP0CG30 244 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 TMEM11P17152 192 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 ZBTB25P24278 435 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 OR3A3P47888 321 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 ALDH3B2P48448 385 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 GNG2P59768 71 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 ARL6IP1Q15041 203 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 Q3ZCU0 254 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 HACD4Q5VWC8 232 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 STEAP3Q658P3 488 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 SLC35E3Q7Z769 313 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 ANKRD13BQ86YJ7 626 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 TGIF2LXQ8IUE1 241 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 OR8H3Q8N146 312 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 COMMD1Q8N668 190 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 C5orf56Q8N8D9 126 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 SAMD12Q8N8I0 201 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 NUDCD2Q8WVJ2 157 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 RTN4IP1Q8WWV3 396 aaPredicted RBP7.95□□□□□ -1.14
GGA3-219ENST00000584550 SLC25A46Q96AG3 418 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 PARP12Q9H0J9 701 aaKnown RBP7.95□□□□□ -1.14
GGA3-219ENST00000584550 DIABLOQ9NR28 239 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 RNF150Q9ULK6 438 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 SPATA2Q9UM82 520 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 SORL1Q92673 2214 aa7.95□□□□□ -1.14
GGA3-219ENST00000584550 IGKV1-6A0A0C4DH72 117 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 ZNF736B4DX44 427 aaPredicted RBP7.94□□□□□ -1.14
GGA3-219ENST00000584550 GABARAPO95166 117 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 FCER2P06734 321 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 GSTP1P09211 210 aaKnown RBP7.94□□□□□ -1.14
GGA3-219ENST00000584550 PTHLHP12272 177 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 SPNP16150 400 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 SCAND1P57086 179 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 ZNF816Q0VGE8 651 aaPredicted RBP7.94□□□□□ -1.14
GGA3-219ENST00000584550 CTF1Q16619 201 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 SRSF7Q16629 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
GGA3-219ENST00000584550 IGSF11Q5DX21 431 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 CLVS1Q8IUQ0 354 aaPredicted RBP7.94□□□□□ -1.14
GGA3-219ENST00000584550 FOXRED2Q8IWF2 684 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 OR11H1Q8NG94 326 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 OR4A4PQ8NGN8 299 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 ST6GALNAC6Q969X2 333 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 S100A16Q96FQ6 103 aaKnown RBP7.94□□□□□ -1.14
GGA3-219ENST00000584550 ABHD14BQ96IU4 210 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 TM2D3Q9BRN9 247 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 C11orf54Q9H0W9 315 aaPredicted RBP7.94□□□□□ -1.14
GGA3-219ENST00000584550 DCSTAMPQ9H295 470 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 COMMD3Q9UBI1 195 aa7.94□□□□□ -1.14
GGA3-219ENST00000584550 IGKV1D-8A0A087WSZ0 117 aa7.93□□□□□ -1.14
GGA3-219ENST00000584550 FAM90A9PA6NNJ1 464 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms