RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TRBV6-7A0A0A0MS04 114 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 HMSDA8MTL9 139 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 FAM25EA8MYX2 175 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 SPINT2O43291 252 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 AADACP22760 399 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 NUP62P37198 522 aaPredicted RBP11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 SLC9A3R2Q15599 337 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 NCR3LG1Q68D85 454 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 LGI3Q8N145 548 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 THAP6Q8TBB0 222 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 GALMQ96C23 342 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 COQ2Q96H96 371 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 ZNF714Q96N38 554 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 PCGF1Q9BSM1 259 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 NMES1Q9C002 83 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 SLC5A7Q9GZV3 580 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 SIRPDQ9H106 197 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 SLC2A9Q9NRM0 540 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 TAS2R3Q9NYW6 316 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 KIF25Q9UIL4 384 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 OR2W1Q9Y3N9 320 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 RBM7Q9Y580 266 aaKnown RBP11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 KIAA2026Q5HYC2 2103 aa11.05□□□□□ -0.64
CSNK1D-220ENST00000581737 DUXBA0A1W2PPF3 345 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 TUSC2O75896 110 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 MMP9P14780 707 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 GLIPR1P48060 266 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 LUMP51884 338 aaPredicted RBP11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 ERVFRD-1P60508 538 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 ZNF273Q14593 569 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 SMCO1Q147U7 214 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 NDUFA5Q16718 116 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 TPRX1Q8N7U7 411 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 PLPPR1Q8TBJ4 325 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 SECTM1Q8WVN6 248 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 CORO2AQ92828 525 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 TMEM230Q96A57 120 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 AKR1E2Q96JD6 320 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 SPIN2AQ99865 258 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 SPIN2BQ9BPZ2 258 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 UNKLQ9H9P5 680 aaKnown RBP11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 TRRAPQ9Y4A5 3859 aa11.04□□□□□ -0.64
CSNK1D-220ENST00000581737 DBX1A6NMT0 343 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 ZNF729A6NN14 1252 aaPredicted RBP11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 L7N2F9 121 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 RGS13O14921 159 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 SCTP09683 121 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 CCL3L1P16619 93 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 PI3P19957 117 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 GZMHP20718 246 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 NFYAP23511 347 aaPredicted RBP11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 PRTN3P24158 256 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 BPIFB3P59826 476 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 MSMO1Q15800 293 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 IGSF11Q5DX21 431 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 GPR157Q5UAW9 335 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 ZNF767PQ75MW2 155 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 H1FOOQ8IZA3 346 aaPredicted RBP11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 C9orf62Q8N4C0 152 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 ZBTB34Q8NCN2 500 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 OR10V1Q8NGI7 309 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 IL1F10Q8WWZ1 152 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 TBX15Q96SF7 602 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 TAF9BQ9HBM6 251 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 PIPOXQ9P0Z9 390 aa11.03□□□□□ -0.64
CSNK1D-220ENST00000581737 CMYA5Q8N3K9 4069 aa11.02□□□□□ -0.64
CSNK1D-220ENST00000581737 FXYD6-FXYD2A0A087WZ82 144 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 TRAV40A0A0B4J280 105 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 C13orf42A0A1B0GVH6 325 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 C17orf98A8MV24 154 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 SMLR1H3BR10 107 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 AVPP01185 164 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 FSHBP01225 129 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 DLX6P56179 175 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 H2BFSP57053 126 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 TCF23Q7RTU1 214 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 Q8N7P7 452 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 EDARADDQ8WWZ3 215 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 HEXA-AS1Q9H8Q6 139 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 LIN7CQ9NUP9 197 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 NUP50Q9UKX7 468 aa11.02□□□□□ -0.65
CSNK1D-220ENST00000581737 A0A0D9SG52 128 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 MPPED1O15442 326 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 ATG12O94817 140 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 SIX6O95475 246 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 RLN2P04090 185 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 SLC25A4P12235 298 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 RPA2P15927 270 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 RCC1P18754 421 aaPredicted RBP11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 PHLDA2Q53GA4 152 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 LY6G6FQ5SQ64 297 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 HEPN1Q6WQI6 88 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 LIAT1Q6ZQX7 453 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 LRTM2Q8N967 370 aa11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
CSNK1D-220ENST00000581737 LHX4Q969G2 390 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms