RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CETN3O15182 167 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 HPGDSO60760 199 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 OR4A8P0C604 315 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 PET100P0DJ07 73 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 CCL3P10147 92 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 HIST1H1CP16403 213 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 F8A1P23610 371 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 CD40LGP29965 261 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 DAD1P61803 113 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 HERVK_113P63121 156 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 HPCAP84074 193 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 MAPK14Q16539 360 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 CLEC12BQ2HXU8 276 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 ATP5L2Q7Z4Y8 100 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 ASB13Q8WXK3 278 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 RNASE6Q93091 150 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 SMIM19Q96E16 107 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 OR7D2Q96RA2 312 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 MED18Q9BUE0 208 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 SMDT1Q9H4I9 107 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 FAM206AQ9NX38 181 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 GLS2Q9UI32 602 aa1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-204ENST00000581226 C1orf232A0A0U1RR37 186 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 ZNF860A6NHJ4 632 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 GOLGA8KD6RF30 607 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 GOLGA8MH3BSY2 632 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 MRASO14807 208 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 LY6HO94772 140 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 OCMP0CE72 109 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 ESDP10768 282 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 PPP1CCP36873 323 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 PLEKHG7Q6ZR37 379 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 TMEM251Q8N6I4 163 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 OR11H1Q8NG94 326 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 ERMNQ8TAM6 284 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 ABHD14BQ96IU4 210 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 NSRP1Q9H0G5 558 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 PARVAQ9NVD7 372 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 ATP6V1DQ9Y5K8 247 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 SNX10Q9Y5X0 201 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 A0A1W2PP64 1363 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 KIAA2026Q5HYC2 2103 aa1.45□□□□□ -2.18
SMCHD1-204ENST00000581226 MDC1Q14676 2089 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 REREQ9P2R6 1566 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 ZFHX2Q9C0A1 2572 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 VPS37CA5D8V6 355 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 LINC00862A6NCI5 91 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 ZW10O43264 779 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 HBZP02008 142 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 GZMBP10144 247 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 COX5BP10606 129 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 NQO1P15559 274 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 UGT2B7P16662 529 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 OR10J1P30954 320 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 IFNGR2P38484 337 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 RWDD2BP57060 319 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 ZNF117Q03924 483 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 DNAL1Q4LDG9 190 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 LGALS9CQ6DKI2 356 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 C1orf174Q8IYL3 243 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 CDCA4Q9BXL8 241 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 PTPRBP23467 1997 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 SIPA1L1O43166 1804 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 PTPRSQ13332 1948 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 MALRD1Q5VYJ5 2156 aa1.44□□□□□ -2.18
SMCHD1-204ENST00000581226 MDFIC2A0A1B0GVS7 189 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 M0R381 172 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 YEATS4O95619 227 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 HLA-DRAP01903 254 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 CRYBA1P05813 215 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 CD7P09564 240 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 LINC00614P0C842 121 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 CFL1P23528 166 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 SLC35A2P78381 396 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 RASL11AQ6T310 242 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 CCDC121Q6ZUS5 278 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 HAVCR2Q8TDQ0 301 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 TLCD1Q96CP7 247 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 DCUN1D5Q9BTE7 237 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 ZNF471Q9BX82 626 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 DERL2Q9GZP9 239 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 DNAJC12Q9UKB3 198 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 HHLA2Q9UM44 414 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 FIS1Q9Y3D6 152 aa1.43□□□□□ -2.18
SMCHD1-204ENST00000581226 IGHV3-73A0A0B4J1V6 119 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 STK16O75716 305 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 NPPCP23582 126 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 CD79BP40259 229 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 LPAR6P43657 344 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 SERPINB10P48595 397 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 AKR1C2P52895 323 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 MAP3K7CLP57077 242 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 SNAP25P60880 206 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 CXCR4P61073 352 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 RPS24P62847 133 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 LGALS9BQ3B8N2 356 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 C2orf91Q6ZV80 131 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 NATD1Q8N6N6 113 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms