RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 FSTP19883 344 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 LGALS7P47929 136 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 MECP2P51608 486 aaKnown RBP7.52□□□□□ -1.21
RFFL-208ENST00000581039 ALDH3A2P51648 485 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 HMGN3Q15651 99 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 Q499Y3 187 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 ZNF343Q6P1L6 599 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 LAX1Q8IWV1 398 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 CDH26Q8IXH8 852 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 DEFB125Q8N687 156 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 DRAXINQ8NBI3 349 aaPredicted RBP7.52□□□□□ -1.21
RFFL-208ENST00000581039 OR13C5Q8NGS8 318 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 SNAPC3Q92966 411 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 SMIM19Q96E16 107 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 ABHD14BQ96IU4 210 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 USMG5Q96IX5 58 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 CYYR1Q96J86 154 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 Q96M66 194 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 TMEM68Q96MH6 324 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 NEDD4LQ96PU5 975 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 OR14A2Q96R54 314 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 ST6GALNAC5Q9BVH7 336 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 BABAM2Q9NXR7 383 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 ADAM30Q9UKF2 790 aa7.52□□□□□ -1.21
RFFL-208ENST00000581039 HERC2O95714 4834 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 A0A0B4J203 849 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 TRBV5-5A0A0J9YX44 114 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 A0A1W2PPK0 400 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 CXorf65A6NEN9 183 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 OR11H12B2RN74 326 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 CD7P09564 240 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
RFFL-208ENST00000581039 CAPGP40121 348 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 CEACAM6P40199 344 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 ETV1P50549 477 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 DYRK1AQ13627 763 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 CD300EQ496F6 205 aaPredicted RBP7.51□□□□□ -1.21
RFFL-208ENST00000581039 YIF1BQ5BJH7 314 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 OR2G6Q5TZ20 316 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 BVESQ8NE79 360 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 SETD6Q8TBK2 473 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 FAM46BQ96A09 425 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 SULT4A1Q9BR01 284 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 FAAP24Q9BTP7 215 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 TINAGL1Q9GZM7 467 aaPredicted RBP7.51□□□□□ -1.21
RFFL-208ENST00000581039 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 CHMP1AQ9HD42 196 aaPredicted RBP7.51□□□□□ -1.21
RFFL-208ENST00000581039 FGF20Q9NP95 211 aaPredicted RBP7.51□□□□□ -1.21
RFFL-208ENST00000581039 FAM53CQ9NYF3 392 aa7.51□□□□□ -1.21
RFFL-208ENST00000581039 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 ZNF785A8K8V0 405 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 H3BNX3 289 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 ITGB1BP1O14713 200 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 TRBV12-3P01733 135 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 APOA2P02652 100 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 DCKP27707 260 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 GUCA2BQ16661 112 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 PDPNQ86YL7 162 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 DYNLRB2Q8TF09 96 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 EDARADDQ8WWZ3 215 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 AGMATQ9BSE5 352 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 PARP12Q9H0J9 701 aaKnown RBP7.5□□□□□ -1.21
RFFL-208ENST00000581039 C11orf54Q9H0W9 315 aaPredicted RBP7.5□□□□□ -1.21
RFFL-208ENST00000581039 COA4Q9NYJ1 87 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 GHRLQ9UBU3 117 aa7.5□□□□□ -1.21
RFFL-208ENST00000581039 TRBV5-7A0A0A0MS05 114 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 NUPR2A6NF83 97 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 MYL12AP19105 171 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 ZBTB25P24278 435 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 RASSF2P50749 326 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 RPS11P62280 158 aaKnown RBP eCLIP7.49□□□□□ -1.21
RFFL-208ENST00000581039 DEFA5Q01523 94 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 PJVKQ0ZLH3 352 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 PMS2P11Q13670 270 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 DEFB114Q30KQ6 69 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 C6orf201Q7Z4U5 140 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 CBR4Q8N4T8 237 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 SVOPQ8N4V2 548 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 ZNF383Q8NA42 475 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 PHB2Q99623 299 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 UQCC2Q9BRT2 126 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 WFDC10AQ9H1F0 79 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 ZNF221Q9UK13 617 aa7.49□□□□□ -1.21
RFFL-208ENST00000581039 LOC100130705A0A1B0GUX0 176 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 IRGMA1A4Y4 181 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 MSGN1A6NI15 193 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 PROP1O75360 226 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 CIB2O75838 187 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 NAPSAO96009 420 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 LALBAP00709 142 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 UBBP0CG47 229 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 KIR2DS2P43631 304 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 LINC00205P59089 165 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 SSBP2P81877 361 aaPredicted RBP7.48□□□□□ -1.21
RFFL-208ENST00000581039 ATP5G2Q06055 141 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 ZNF880Q6PDB4 577 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 MOB1BQ7L9L4 216 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 SLC16A13Q7RTY0 426 aa7.48□□□□□ -1.21
RFFL-208ENST00000581039 NKAIN3Q8N8D7 197 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms