RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 FAM71E2Q8N5Q1 922 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 NUDCD2Q8WVJ2 157 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 AGMATQ9BSE5 352 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 ST6GALNAC5Q9BVH7 336 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 TOLLIPQ9H0E2 274 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 OR2D2Q9H210 308 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 PLSCR3Q9NRY6 295 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 LINC00527Q9UJ94 153 aa9.19□□□□□ -0.94
GGA3-204ENST00000578208 TRAV18A0A075B6X5 111 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 TRIM64CA6NLI5 447 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 H0YJW9 148 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 OR8U9P0C7N5 309 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 OR5H8P0DN80 308 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 MGAM2Q2M2H8 2515 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 ZNF260Q3ZCT1 412 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 TEX38Q6PEX7 206 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 C10orf99Q6UWK7 81 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 OR5H6Q8NGV6 325 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 SPATA2Q9UM82 520 aa9.18□□□□□ -0.94
GGA3-204ENST00000578208 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 NUDT19A8MXV4 375 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 M0R1X1 148 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 HLA-DRB1P01911 266 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 CNTFRP26992 372 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 ARPC4P59998 168 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 C5orf64Q2M2E5 130 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 CXorf66Q5JRM2 361 aaPredicted RBP9.17□□□□□ -0.94
GGA3-204ENST00000578208 UBE2NLQ5JXB2 153 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 LIN54Q6MZP7 749 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 PDPNQ86YL7 162 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 DRAXINQ8NBI3 349 aaPredicted RBP9.17□□□□□ -0.94
GGA3-204ENST00000578208 NPBQ8NG41 125 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 OR5AN1Q8NGI8 311 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 SLC25A38Q96DW6 304 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 TSNAXQ99598 290 aaKnown RBP9.17□□□□□ -0.94
GGA3-204ENST00000578208 RNF5Q99942 180 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 FUNDC2Q9BWH2 189 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 PARP11Q9NR21 331 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 SLC35D1Q9NTN3 355 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 ZFP57Q9NU63 452 aa9.17□□□□□ -0.94
GGA3-204ENST00000578208 ELF5Q9UKW6 265 aaPredicted RBP9.17□□□□□ -0.94
GGA3-204ENST00000578208 RRHO14718 337 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 NDUFA3O95167 84 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 CD33P20138 364 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 TGFBR1P36897 503 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 RPS19P39019 145 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 THBS3P49746 956 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 RPS16P62249 146 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 RPL23AP62750 156 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 TAGLNQ01995 201 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 CNIH2Q6PI25 160 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 H1FOOQ8IZA3 346 aaPredicted RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 ABHD5Q8WTS1 349 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 RBMXL1Q96E39 390 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 S100A16Q96FQ6 103 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 MRPS26Q9BYN8 205 aaKnown RBP9.16□□□□□ -0.94
GGA3-204ENST00000578208 OR51J1Q9H342 316 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 FBXL15Q9H469 300 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 SDHAF2Q9NX18 166 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 ANXA10Q9UJ72 324 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 ZNF580Q9UK33 172 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 GAB2Q9UQC2 676 aa9.16□□□□□ -0.94
GGA3-204ENST00000578208 IGKV1D-8A0A087WSZ0 117 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 SLC22A5O76082 557 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 SPDEFO95238 335 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 IGF1P05019 195 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 ELANEP08246 267 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 SLC6A1P30531 599 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 CBX5P45973 191 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 LUMP51884 338 aaPredicted RBP9.15□□□□□ -0.94
GGA3-204ENST00000578208 VBP1P61758 197 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 DEFA6Q01524 100 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 RTL8BQ17RB0 113 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 SAMD12Q8N8I0 201 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 ZNF383Q8NA42 475 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 KLHL30-AS1Q8NEE0 82 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 OR13F1Q8NGS4 319 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 SLC25A46Q96AG3 418 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 FLYWCH2Q96CP2 140 aaKnown RBP9.15□□□□□ -0.94
GGA3-204ENST00000578208 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
GGA3-204ENST00000578208 ADTRPQ96IZ2 230 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 RITA1Q96K30 269 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 AUNIPQ9H7T9 357 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 IFT46Q9NQC8 304 aa9.15□□□□□ -0.94
GGA3-204ENST00000578208 METTL1Q9UBP6 276 aaKnown RBP9.15□□□□□ -0.94
GGA3-204ENST00000578208 TRRAPQ9Y4A5 3859 aa9.15□□□□□ -0.95
GGA3-204ENST00000578208 ATP6V0E1O15342 81 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 XRCC3O43542 346 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 SSX5O60225 188 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 SMIM18P0DKX4 95 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 RRASP10301 218 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 NCS1P62166 190 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 FOXE3Q13461 319 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 TMEM69Q5SWH9 247 aa9.14□□□□□ -0.95
GGA3-204ENST00000578208 ZNF660Q6AZW8 331 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms