RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 M0QYG6 137 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 SLC22A5O76082 557 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 CD3DP04234 171 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 IFNA6P05013 189 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 FAM106CPP0CH98 169 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 FXYD4P59646 89 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF45Q02386 682 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 HABP2Q14520 560 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-217ENST00000575711 STEAP1BQ6NZ63 245 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 C16orf87Q6PH81 154 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 DHRS11Q6UWP2 260 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF645Q8N7E2 425 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 ZFAND2BQ8WV99 257 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 CFHR4Q92496 578 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 NABP2Q9BQ15 211 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF251Q9BRH9 671 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 THAP7Q9BT49 309 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-217ENST00000575711 SRRQ9GZT4 340 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 SDHAF2Q9NX18 166 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
RPAIN-217ENST00000575711 IGHV3-72A0A0B4J1Y9 119 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 A6NDX4 124 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 M0R1X1 148 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 RAB3DO95716 219 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 CD74P04233 296 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
RPAIN-217ENST00000575711 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 CD24P25063 80 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 CD1BP29016 333 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 HES1Q14469 280 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 THNSL2Q86YJ6 484 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 GDPD1Q8N9F7 314 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 TINAGL1Q9GZM7 467 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-217ENST00000575711 RAB18Q9NP72 206 aa11.23□□□□□ -0.61
RPAIN-217ENST00000575711 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
RPAIN-217ENST00000575711 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 FAM90A9PA6NNJ1 464 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 GPR137BO60478 399 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 IGKV1D-33P01593 117 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 IGKV1-33P01594 117 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 CRYBA1P05813 215 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 AKAIN1P0CW23 69 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 CT45A6P0DMU7 189 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 CT45A5P0DMU8 189 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 CT45A7P0DMV0 189 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 AP3S2P59780 193 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 LSAMPQ13449 338 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 MEF2DQ14814 521 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF660Q6AZW8 331 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-217ENST00000575711 TMEM219Q86XT9 240 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 ARRDC1Q8N5I2 433 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 TRIM63Q969Q1 353 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 MOB3AQ96BX8 217 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 SLC5A7Q9GZV3 580 aa11.22□□□□□ -0.61
RPAIN-217ENST00000575711 FAM181BA6NEQ2 426 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 OR5H14A6NHG9 310 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 PROP1O75360 226 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 AMY2AP04746 511 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 TMEM11P17152 192 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 RPL15P61313 204 aaKnown RBP11.21□□□□□ -0.61
RPAIN-217ENST00000575711 MSMO1Q15800 293 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 TRIQKQ629K1 86 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 DHRS7BQ6IAN0 325 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-217ENST00000575711 CCBE1Q6UXH8 406 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-217ENST00000575711 GLDNQ6ZMI3 551 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-217ENST00000575711 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 TOMM5Q8N4H5 51 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 DRAXINQ8NBI3 349 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-217ENST00000575711 OR4D10Q8NGI6 311 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 OR2T10Q8NGZ9 312 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 BORCS5Q969J3 196 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 C5orf30Q96GV9 206 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 AKR1E2Q96JD6 320 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 AKIP1Q9NQ31 210 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 CCL28Q9NRJ3 127 aa11.21□□□□□ -0.61
RPAIN-217ENST00000575711 DISC1C4P0D8 188 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 H0YJW9 148 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 MOSP00540 346 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 APOA2P02652 100 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 MC5RP33032 325 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 FAUP35544 74 aaKnown RBP11.2□□□□□ -0.62
RPAIN-217ENST00000575711 INPP1P49441 399 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 THBS3P49746 956 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 EBI3Q14213 229 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 HNF4GQ14541 408 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 SCGB2B2Q4G0G5 96 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 ZBTB34Q8NCN2 500 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 OR5AN1Q8NGI8 311 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 OR4C16Q8NGL9 310 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 ADTRPQ96IZ2 230 aa11.2□□□□□ -0.62
RPAIN-217ENST00000575711 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-217ENST00000575711 RBM14Q96PK6 669 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms