RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ABRACLQ9P1F3 81 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 GPX5O75715 221 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 TPPPO94811 219 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 LALBAP00709 142 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 IGKV1-16P04430 117 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 Q499Y3 187 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 DRAXINQ8NBI3 349 aaPredicted RBP15.03■□□□□ -0
CCDC40-206ENST00000572083 PYDC1Q8WXC3 89 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 GHSRQ92847 366 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 SULT4A1Q9BR01 284 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 NEURL2Q9BR09 285 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 MRPS18AQ9NVS2 196 aaKnown RBP15.03■□□□□ -0
CCDC40-206ENST00000572083 SIGLEC8Q9NYZ4 499 aa15.03■□□□□ -0
CCDC40-206ENST00000572083 PEF1Q9UBV8 284 aaKnown RBP15.03■□□□□ -0
CCDC40-206ENST00000572083 RPL36Q9Y3U8 105 aaKnown RBP15.03■□□□□ -0
CCDC40-206ENST00000572083 HECTD4Q9Y4D8 3996 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 OGG1O15527 345 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 CD7P09564 240 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 CPEP16870 476 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 SSBP2P81877 361 aaPredicted RBP15.02■□□□□ -0
CCDC40-206ENST00000572083 RPEL1Q2QD12 228 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 ZFP41Q8N8Y5 198 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 APH1BQ8WW43 257 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 TSNAXQ99598 290 aaKnown RBP15.02■□□□□ -0
CCDC40-206ENST00000572083 RNF5Q99942 180 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 LRRC42Q9Y546 428 aa15.02■□□□□ -0
CCDC40-206ENST00000572083 H3BNX3 289 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 SPDEFO95238 335 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 LINC00205P59089 165 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 RPS16P62249 146 aaKnown RBP15.01□□□□□ -0.01
CCDC40-206ENST00000572083 RPS11P62280 158 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC40-206ENST00000572083 TATDN3Q17R31 274 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 TMPRSS11AQ6ZMR5 421 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 CBR4Q8N4T8 237 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 SVOPQ8N4V2 548 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 BVESQ8NE79 360 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 SRD5A3Q9H8P0 318 aa15.01□□□□□ -0.01
CCDC40-206ENST00000572083 FGF20Q9NP95 211 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-206ENST00000572083 OR2A4O95047 310 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 CNIH1O95406 144 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 CAPGP40121 348 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 PJVKQ0ZLH3 352 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 SMN1Q16637 294 aaKnown RBP15□□□□□ -0.01
CCDC40-206ENST00000572083 CD300EQ496F6 205 aaPredicted RBP15□□□□□ -0.01
CCDC40-206ENST00000572083 ZNF343Q6P1L6 599 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 SETD6Q8TBK2 473 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 AGMATQ9BSE5 352 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 FAAP24Q9BTP7 215 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 TINAGL1Q9GZM7 467 aaPredicted RBP15□□□□□ -0.01
CCDC40-206ENST00000572083 BABAM2Q9NXR7 383 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 SLC2A8Q9NY64 477 aa15□□□□□ -0.01
CCDC40-206ENST00000572083 TRBV5-7A0A0A0MS05 114 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 AADACP22760 399 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 MECP2P51608 486 aaKnown RBP14.99□□□□□ -0.01
CCDC40-206ENST00000572083 PMS2P11Q13670 270 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 YIF1BQ5BJH7 314 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 C6orf201Q7Z4U5 140 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 ZNF383Q8NA42 475 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 OR2K2Q8NGT1 345 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 PGLYRP3Q96LB9 341 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 NEDD4LQ96PU5 975 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 CHMP1AQ9HD42 196 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-206ENST00000572083 COA4Q9NYJ1 87 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 OR1A1Q9P1Q5 309 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 PEMTQ9UBM1 199 aa14.99□□□□□ -0.01
CCDC40-206ENST00000572083 PROP1O75360 226 aa14.98□□□□□ -0.01
CCDC40-206ENST00000572083 RBMXL2O75526 392 aaKnown RBP14.98□□□□□ -0.01
CCDC40-206ENST00000572083 APELAP0DMC3 54 aa14.98□□□□□ -0.01
CCDC40-206ENST00000572083 CDH26Q8IXH8 852 aa14.98□□□□□ -0.01
CCDC40-206ENST00000572083 DDB2Q92466 427 aa14.98□□□□□ -0.01
CCDC40-206ENST00000572083 ST6GALNAC5Q9BVH7 336 aa14.98□□□□□ -0.01
CCDC40-206ENST00000572083 C11orf54Q9H0W9 315 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-206ENST00000572083 CLEC2DQ9UHP7 191 aa14.98□□□□□ -0.01
CCDC40-206ENST00000572083 PNMA8CA0A1B0GUJ8 204 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 ZNF785A8K8V0 405 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 OR11H12B2RN74 326 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 DCKP27707 260 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 LGALS7P47929 136 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 OR10K2Q6IF99 312 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 LAX1Q8IWV1 398 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 FAM53CQ9NYF3 392 aa14.97□□□□□ -0.01
CCDC40-206ENST00000572083 LOC100130705A0A1B0GUX0 176 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 CXorf65A6NEN9 183 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 DYNC1I1O14576 645 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 NAPSAO96009 420 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 APOA2P02652 100 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 CEACAM6P40199 344 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 ZNF880Q6PDB4 577 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 PDPNQ86YL7 162 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 EDARADDQ8WWZ3 215 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 DERL3Q96Q80 235 aa14.96□□□□□ -0.01
CCDC40-206ENST00000572083 A0A0B4J203 849 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 BMPR1BO00238 502 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 ITGB1BP1O14713 200 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 WBP4O75554 376 aaKnown RBP14.95□□□□□ -0.02
CCDC40-206ENST00000572083 CIB2O75838 187 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 IGLV2-23P01705 113 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 MYL12AP19105 171 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 EDN2P20800 178 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 GUCA2BQ16661 112 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms