RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 FBXL15Q9H469 300 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 IGHV7-81A0A0B4J1V7 117 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR5H14A6NHG9 310 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 G3V318 75 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 ATP6V0E1O15342 81 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 SDC2P34741 201 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 THBS3P49746 956 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 RAB25P57735 213 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 KIR2DS1Q14954 304 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 DEFB136Q30KP8 78 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 NPBQ8NG41 125 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 PTX4Q96A99 478 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 NECAP2Q9NVZ3 263 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 WASHC3Q9Y3C0 194 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 VWFP04275 2813 aa13.94□□□□□ -0.18
CTDNEP1-207ENST00000572043 M0R1X1 148 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 PROP1O75360 226 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 IGF1P05019 195 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 CD36P16671 472 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 CFHR3Q02985 330 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 FOXE3Q13461 319 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 CDNFQ49AH0 187 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 KCTD21Q4G0X4 260 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 SFXN4Q6P4A7 337 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 TPRA1Q86W33 373 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 ZNF383Q8NA42 475 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR8U1Q8NH10 309 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR10J5Q8NHC4 309 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 LGALS14Q8TCE9 139 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 CLCC1Q96S66 551 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR51J1Q9H342 316 aa13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 AURKAIP1Q9NWT8 199 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-207ENST00000572043 IGKV1D-8A0A087WSZ0 117 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 RRHO14718 337 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 NDUFA3O95167 84 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 HLA-DRB1P01911 266 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 TFAP2AP05549 437 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 ELANEP08246 267 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 MC5RP33032 325 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 SERPINB10P48595 397 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 NDPQ00604 133 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR5AN1Q8NGI8 311 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 MRAPQ8TCY5 172 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 ABHD5Q8WTS1 349 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 RCC1LQ96I51 464 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 GINS4Q9BRT9 223 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 CABLES2Q9BTV7 478 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 CENPOQ9BU64 300 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR2D2Q9H210 308 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 GHITMQ9H3K2 345 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 RBM7Q9Y580 266 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 A3GALT2U3KPV4 340 aa13.92□□□□□ -0.18
CTDNEP1-207ENST00000572043 J3QRK9 145 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 FCN1O00602 326 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 IGHG4P01861 327 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 IGKV1-16P04430 117 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR5H8P0DN80 308 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 HOXD3P31249 432 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 MYCNOSP40205 109 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 ECSCRQ19T08 205 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 IDNKQ5T6J7 187 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 RAX2Q96IS3 184 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 ST6GALNAC5Q9BVH7 336 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 KLK15Q9H2R5 256 aa13.91□□□□□ -0.18
CTDNEP1-207ENST00000572043 TRBV6-7A0A0A0MS04 114 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 TRAV41A0A0B4J266 112 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 CCL24O00175 119 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 APOA2P02652 100 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 RPS16P62249 146 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 NUDCD2Q8WVJ2 157 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR5B12Q96R08 314 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 P2RX4Q99571 388 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 SDHAF2Q9NX18 166 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 METTL1Q9UBP6 276 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 FBXO7Q9Y3I1 522 aa13.9□□□□□ -0.18
CTDNEP1-207ENST00000572043 TMEM235A6NFC5 223 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 PSMB8P28062 276 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 PPIFP30405 207 aaKnown RBP13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 SLC6A1P30531 599 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 TGFBR1P36897 503 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 CX3CL1P78423 397 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 PSG5Q15238 335 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 HACD4Q5VWC8 232 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 TMEM65Q6PI78 240 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 REC114Q7Z4M0 266 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 OR5H6Q8NGV6 325 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 CASTOR1Q8WTX7 329 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 C5orf30Q96GV9 206 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 FAM103A1Q9BTL3 118 aaKnown RBP13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 SLC35D1Q9NTN3 355 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 GAB2Q9UQC2 676 aa13.89□□□□□ -0.19
CTDNEP1-207ENST00000572043 A0A1W2PN81 502 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 RBBP9O75884 186 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 DUS4LO95620 317 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 DTYMKP23919 212 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 CHRNA7P36544 502 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 CDX1P47902 265 aaPredicted RBP13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 GNG2P59768 71 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 KRTAP10-11P60412 298 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms