RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 CKLFQ9UBR5 152 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 RNF150Q9ULK6 438 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 RAB29O14966 203 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 DCKP27707 260 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 PJVKQ0ZLH3 352 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 DYRK1AQ13627 763 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 YIF1BQ5BJH7 314 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 ZNF383Q8NA42 475 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 POC5Q8NA72 575 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 NICN1Q9BSH3 213 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 WFDC10AQ9H1F0 79 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 TUBA4BQ9H853 241 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 PIPOXQ9P0Z9 390 aa14.55□□□□□ -0.08
NUP88-203ENST00000572019 CIB2O75838 187 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 IFNA6P05013 189 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 ZP3P21754 424 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 CAPGP40121 348 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 INSL4Q14641 139 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 FXYD3Q14802 87 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 ZNF880Q6PDB4 577 aa14.54□□□□□ -0.08
NUP88-203ENST00000572019 HDHD3Q9BSH5 251 aaPredicted RBP14.54□□□□□ -0.08
NUP88-203ENST00000572019 C11orf54Q9H0W9 315 aaPredicted RBP14.54□□□□□ -0.08
NUP88-203ENST00000572019 C13orf42A0A1B0GVH6 325 aa14.53□□□□□ -0.08
NUP88-203ENST00000572019 RBMY1BA6NDE4 496 aaKnown RBP14.53□□□□□ -0.08
NUP88-203ENST00000572019 RBMY1EA6NEQ0 496 aaKnown RBP14.53□□□□□ -0.08
NUP88-203ENST00000572019 SLC25A17O43808 307 aa14.53□□□□□ -0.08
NUP88-203ENST00000572019 NAPSAO96009 420 aa14.53□□□□□ -0.08
NUP88-203ENST00000572019 RBMY1DP0C7P1 496 aaKnown RBP14.53□□□□□ -0.08
NUP88-203ENST00000572019 HTR2CP28335 458 aa14.53□□□□□ -0.08
NUP88-203ENST00000572019 STEAP1Q9UHE8 339 aa14.53□□□□□ -0.08
NUP88-203ENST00000572019 DIMT1Q9UNQ2 313 aaKnown RBP14.53□□□□□ -0.08
NUP88-203ENST00000572019 CEPT1Q9Y6K0 416 aa14.53□□□□□ -0.08
NUP88-203ENST00000572019 A0A0A6YYD4 124 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 H0Y980 276 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 RBBP9O75884 186 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 BRI3O95415 125 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 MC5RP33032 325 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 RASSF2P50749 326 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 MECP2P51608 486 aaKnown RBP14.52□□□□□ -0.09
NUP88-203ENST00000572019 SETD6Q8TBK2 473 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 ABRACLQ9P1F3 81 aa14.52□□□□□ -0.09
NUP88-203ENST00000572019 DYNC1I1O14576 645 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 SLC22A1O15245 554 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 IGLV2-23P01705 113 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 APELAP0DMC3 54 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 CPEP16870 476 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 EDN2P20800 178 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 UNC119Q13432 240 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 GTSCR1Q86UQ5 136 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 CDH26Q8IXH8 852 aa14.51□□□□□ -0.09
NUP88-203ENST00000572019 EXOSC1Q9Y3B2 195 aaKnown RBP14.51□□□□□ -0.09
NUP88-203ENST00000572019 CD7P09564 240 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 MYL12AP19105 171 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 CD40LGP29965 261 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 RPS16P62249 146 aaKnown RBP14.5□□□□□ -0.09
NUP88-203ENST00000572019 MRGPRG-AS1Q2M3A8 158 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 ZNF343Q6P1L6 599 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 NEDD4LQ96PU5 975 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 RNF5Q99942 180 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 C9orf16Q9BUW7 83 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 PEF1Q9UBV8 284 aaKnown RBP14.5□□□□□ -0.09
NUP88-203ENST00000572019 LRRC42Q9Y546 428 aa14.5□□□□□ -0.09
NUP88-203ENST00000572019 CRYGBP07316 175 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 SCTP09683 121 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 CEACAM6P40199 344 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 CD81P60033 236 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 RPS27AP62979 156 aaKnown RBP14.49□□□□□ -0.09
NUP88-203ENST00000572019 LCN12Q6JVE5 192 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 Q8N402 240 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 DEFB125Q8N687 156 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 BVESQ8NE79 360 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 TSNAXQ99598 290 aaKnown RBP14.49□□□□□ -0.09
NUP88-203ENST00000572019 UQCC2Q9BRT2 126 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 CHMP1AQ9HD42 196 aaPredicted RBP14.49□□□□□ -0.09
NUP88-203ENST00000572019 SELENOKQ9Y6D0 94 aa14.49□□□□□ -0.09
NUP88-203ENST00000572019 IGKV1-6A0A0C4DH72 117 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 SHISA3A0PJX4 238 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 ZNF785A8K8V0 405 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 H3BUA1 57 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 ITGB1BP1O14713 200 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 ATP5HO75947 161 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 SPDEFO95238 335 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 CD300EQ496F6 205 aaPredicted RBP14.48□□□□□ -0.09
NUP88-203ENST00000572019 NKAIN3Q8N8D7 197 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 TMEM80Q96HE8 168 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 TINAGL1Q9GZM7 467 aaPredicted RBP14.48□□□□□ -0.09
NUP88-203ENST00000572019 AK3Q9UIJ7 227 aa14.48□□□□□ -0.09
NUP88-203ENST00000572019 A0A0G2JLM5 398 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 CNIH1O95406 144 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 CELP19835 753 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 HLA-DRB3P79483 266 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 QRFPP83859 136 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 RNLSQ5VYX0 342 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 ZFP1Q6P2D0 407 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 LRRTM1Q86UE6 522 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 LINC00476Q8WZB0 136 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 GGHQ92820 318 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 C5orf30Q96GV9 206 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 NEURL2Q9BR09 285 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 TM2D1Q9BX74 207 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms