RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 PIPOXQ9P0Z9 390 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 ZNF230Q9UIE0 474 aaPredicted RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 MGAT4AQ9UM21 535 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 STUB1Q9UNE7 303 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 FBXO7Q9Y3I1 522 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 NOTCH1P46531 2555 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 NOTCH3Q9UM47 2321 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 A0A075B6Q4 140 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 TRBV6-7A0A0A0MS04 114 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 WI2-2373I1.2A0A1W2PRP0 233 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 OR5H14A6NHG9 310 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 NOTOA8MTQ0 251 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 K7EIL1 84 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 M0R1X1 148 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 CCL24O00175 119 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 FCN1O00602 326 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 RRHO14718 337 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 BET1O15155 118 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 HSPA12AO43301 675 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 RRP9O43818 475 aaKnown RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 HLA-DRB1P01911 266 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 ELANEP08246 267 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 EGR2P11161 476 aaPredicted RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 ZBTB25P24278 435 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 GADD45AP24522 165 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 PSMB8P28062 276 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 PPIFP30405 207 aaKnown RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 FGF9P31371 208 aaPredicted RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 SDC2P34741 201 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 RANBP1P43487 201 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 CDX1P47902 265 aaPredicted RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 CX3CL1P78423 397 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 KIAA0141Q14154 515 aaPredicted RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 KIR2DS1Q14954 304 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 C19orf54Q5BKX5 351 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 CXorf66Q5JRM2 361 aaPredicted RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 LIN54Q6MZP7 749 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 REC114Q7Z4M0 266 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 OR4A4PQ8NGN8 299 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 MYOZ3Q8TDC0 251 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 EDARADDQ8WWZ3 215 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 CHCHD6Q9BRQ6 235 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 TOLLIPQ9H0E2 274 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 ATG5Q9H1Y0 275 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 KLK15Q9H2R5 256 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 OR51J1Q9H342 316 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 GNB4Q9HAV0 340 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 TPSG1Q9NRR2 321 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 KIAA1456Q9P272 454 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 DAPK2Q9UIK4 370 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 ZNF221Q9UK13 617 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 SSR3Q9UNL2 185 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 GAB2Q9UQC2 676 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 RRP15Q9Y3B9 282 aaKnown RBP4.22□□□□□ -1.73
CHD3-212ENST00000570758 WASHC3Q9Y3C0 194 aa4.22□□□□□ -1.73
CHD3-212ENST00000570758 TRAV41A0A0B4J266 112 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 LOC100506127A0A0U1RQW1 187 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 METTL21EPA6NDL7 271 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 H7C2Y5 167 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 SSX5O60225 188 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 SOX15O60248 233 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 RBBP9O75884 186 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 IGLV1-40P01703 118 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 IGKV1-16P04430 117 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 TFAP2AP05549 437 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 GSTP1P09211 210 aaKnown RBP4.21□□□□□ -1.74
CHD3-212ENST00000570758 OR8U9P0C7N5 309 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 OR5H8P0DN80 308 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 CD36P16671 472 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 SLC6A1P30531 599 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 MC5RP33032 325 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 TGFBR1P36897 503 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 SERPINB10P48595 397 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 CRIP2P52943 208 aaPredicted RBP4.21□□□□□ -1.74
CHD3-212ENST00000570758 RAB25P57735 213 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 MRPS15P82914 257 aaKnown RBP4.21□□□□□ -1.74
CHD3-212ENST00000570758 MXD1Q05195 221 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 EGFEM1PQ0D2K5 195 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 ARFRP1Q13795 201 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 PSG5Q15238 335 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 NEDD8Q15843 81 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 CDNFQ49AH0 187 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 KCTD21Q4G0X4 260 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 ASPHD1Q5U4P2 390 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 ZNF660Q6AZW8 331 aaPredicted RBP4.21□□□□□ -1.74
CHD3-212ENST00000570758 Q6ZS49 121 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 TPRA1Q86W33 373 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 H1FOOQ8IZA3 346 aaPredicted RBP4.21□□□□□ -1.74
CHD3-212ENST00000570758 ZNF491Q8N8L2 437 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 MINDY2Q8NBR6 621 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.21□□□□□ -1.74
CHD3-212ENST00000570758 OR5H6Q8NGV6 325 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 OR8U1Q8NH10 309 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 LGALS14Q8TCE9 139 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 CASTOR1Q8WTX7 329 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 NUDCD2Q8WVJ2 157 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 C4orf3Q8WVX3 66 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 OR5B12Q96R08 314 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms