RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 GEMIN2O14893 280 aaKnown RBP8.45□□□□□ -1.06
VPS53-207ENST00000570510 HSMCR30P0CW71 290 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 MGMTP16455 207 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 SERPINA2P20848 420 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 HTR2CP28335 458 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 BLVRBP30043 206 aaPredicted RBP8.45□□□□□ -1.06
VPS53-207ENST00000570510 TPPP2P59282 170 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 TATDN3Q17R31 274 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 LY6G6FQ5SQ64 297 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 C6orf183Q5T699 404 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 ZNF773Q6PK81 442 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
VPS53-207ENST00000570510 ZNF497Q6ZNH5 498 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 TMEM91Q6ZNR0 172 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 TPRA1Q86W33 373 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 TCTEX1D1Q8N7M0 179 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 MUL1Q969V5 352 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 PTX4Q96A99 478 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 MS4A10Q96PG2 267 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 URM1Q9BTM9 101 aaKnown RBP8.45□□□□□ -1.06
VPS53-207ENST00000570510 RANGRFQ9HD47 186 aaPredicted RBP8.45□□□□□ -1.06
VPS53-207ENST00000570510 SIGLEC8Q9NYZ4 499 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 RNF150Q9ULK6 438 aa8.45□□□□□ -1.06
VPS53-207ENST00000570510 TRAV39A0A0B4J263 110 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 TMEM14DPA8MWL7 114 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 PDCD6O75340 191 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 HLA-DRB1P01911 266 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 MT-ND4P03905 459 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 SCAND1P57086 179 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 ACTBP60709 375 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 ARL6IP1Q15041 203 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 PLGLAQ15195 96 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 PIGYQ3MUY2 71 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 SYT6Q5T7P8 510 aaPredicted RBP8.44□□□□□ -1.06
VPS53-207ENST00000570510 SPARTQ8N0X7 666 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 FAM89BQ8N5H3 189 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 LINC00311Q8N616 119 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 OR9G4Q8NGQ1 327 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 ARL11Q969Q4 196 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 NEDD4LQ96PU5 975 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 NABP2Q9BQ15 211 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 TMEM59Q9BXS4 323 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 TPSG1Q9NRR2 321 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 ZNF355PQ9NSJ1 428 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 MBNL3Q9NUK0 354 aaKnown RBP8.44□□□□□ -1.06
VPS53-207ENST00000570510 HSF4Q9ULV5 492 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 V9GY05 133 aa8.44□□□□□ -1.06
VPS53-207ENST00000570510 TRBV6-6A0A0A6YYG2 114 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 C13orf42A0A1B0GVH6 325 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 A0A1W2PPK0 400 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 NBR2O15453 112 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 SPINT2O43291 252 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 CRTAPO75718 401 aaPredicted RBP8.43□□□□□ -1.06
VPS53-207ENST00000570510 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 MYL9P24844 172 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 RPS27AP62979 156 aaKnown RBP8.43□□□□□ -1.06
VPS53-207ENST00000570510 QRFPP83859 136 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 TIMM50Q3ZCQ8 353 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 ACTBL2Q562R1 376 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 RAB12Q6IQ22 244 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 MOB1BQ7L9L4 216 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 OR10K1Q8NGX5 313 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 NEURL2Q9BR09 285 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 SELENOIQ9C0D9 397 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 SRD5A3Q9H8P0 318 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 VCX3AQ9NNX9 186 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 GNG12Q9UBI6 72 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
VPS53-207ENST00000570510 IGHV3-43A0A0B4J1X8 118 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 ANKRD34BA5PLL1 514 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 AIPO00170 330 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 SCGNO76038 276 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 TNFAIP8O95379 198 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 DIRAS3O95661 229 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 TRGV3P03979 118 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 IGHV3-43DP0DP04 118 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 RAB6AP20340 208 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 CALRP27797 417 aaKnown RBP8.42□□□□□ -1.06
VPS53-207ENST00000570510 MAP2K4P45985 399 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 SYNJ2BPP57105 145 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 RPS25P62851 125 aaKnown RBP8.42□□□□□ -1.06
VPS53-207ENST00000570510 HTD2P86397 168 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 FABP5Q01469 135 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 P2RY14Q15391 338 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 RAB11BQ15907 218 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 SSX1Q16384 188 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 ATAD3CQ5T2N8 411 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 LGALS9CQ6DKI2 356 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 SLC25A48Q6ZT89 311 aaKnown RBP8.42□□□□□ -1.06
VPS53-207ENST00000570510 DEFB125Q8N687 156 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 UBALD1Q8TB05 177 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 TMEM203Q969S6 136 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 SLA2Q9H6Q3 261 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 PLGRKTQ9HBL7 147 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 KCNIP1Q9NZI2 227 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 STEAP1Q9UHE8 339 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 RAB22AQ9UL26 194 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 PEX16Q9Y5Y5 336 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms