RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 YIPF6Q96EC8 236 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 OR5B12Q96R08 314 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 OR51J1Q9H342 316 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 RNF167Q9H6Y7 350 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 PARP11Q9NR21 331 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 TXNL4BQ9NX01 149 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 RAB22AQ9UL26 194 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 HSF4Q9ULV5 492 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 GAB2Q9UQC2 676 aa10.75□□□□□ -0.69
GTF3C1-211ENST00000569653 TMEM272A0A1B0GTI8 110 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 FCN1O00602 326 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 LDLRAD4O15165 306 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 NBR2O15453 112 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 RGS11O94810 467 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 CT45A6P0DMU7 189 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 CT45A5P0DMU8 189 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 CT45A7P0DMV0 189 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 EGR2P11161 476 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 VEGFCP49767 419 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 LINC00205P59089 165 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 MINDY2Q8NBR6 621 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 SETD6Q8TBK2 473 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 GALMQ96C23 342 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 ABHD14BQ96IU4 210 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 AGMATQ9BSE5 352 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 GON7Q9BXV9 100 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 C12orf4Q9NQ89 552 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 OR1A1Q9P1Q5 309 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 AK3Q9UIJ7 227 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 MGAT4AQ9UM21 535 aa10.74□□□□□ -0.69
GTF3C1-211ENST00000569653 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 IGKV1-6A0A0C4DH72 117 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 NOTOA8MTQ0 251 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 TFAP2AP05549 437 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 RAB6AP20340 208 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 TPRA1Q86W33 373 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 OR2AK2Q8NG84 335 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 ARHGAP5-AS1Q96IT6 56 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 CENPOQ9BU64 300 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 FBXL15Q9H469 300 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 TPSG1Q9NRR2 321 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 SLC23A1Q9UHI7 598 aa10.73□□□□□ -0.69
GTF3C1-211ENST00000569653 TNCP24821 2201 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 METTL21EPA6NDL7 271 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 TGFBR1P36897 503 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 ECI1P42126 302 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 ALDH3B2P48448 385 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 CRIP2P52943 208 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 TMEM50BP56557 158 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 MRPS15P82914 257 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 RUNX1Q01196 453 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 TIMM50Q3ZCQ8 353 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 C9orf66Q5T8R8 295 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 OR13F1Q8NGS4 319 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 PTX4Q96A99 478 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 UBE2E2Q96LR5 201 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 CHCHD6Q9BRQ6 235 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 PECRQ9BY49 303 aa10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 C11orf54Q9H0W9 315 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 DYNC2H1Q8NCM8 4307 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-211ENST00000569653 LOC100506127A0A0U1RQW1 187 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 SMIM30A4D0T7 59 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 H0YJW9 148 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 SCTP09683 121 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 RAB9AP51151 201 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 CX3CL1P78423 397 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 HLA-DRB3P79483 266 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 SSBP2P81877 361 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 ECSCRQ19T08 205 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 PLAC9Q5JTB6 97 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 LIN54Q6MZP7 749 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 FAM71F2Q6NXP2 309 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 OR1N2Q8NGR9 330 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 DCUN1D4Q92564 292 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 RAB3CQ96E17 227 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 CMSS1Q9BQ75 279 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 MRPS26Q9BYN8 205 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 VSIG4Q9Y279 399 aa10.71□□□□□ -0.69
GTF3C1-211ENST00000569653 A0A0B4J203 849 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 RRHO14718 337 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 RAMP3O60896 148 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 CD3GP09693 182 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 CLEC2LP0C7M8 214 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 OR5H8P0DN80 308 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 SDC2P34741 201 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 SLURP1P55000 103 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 SFXN4Q6P4A7 337 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 ZNF383Q8NA42 475 aa10.7□□□□□ -0.7
GTF3C1-211ENST00000569653 DRAXINQ8NBI3 349 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms