RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 Q8N9W7 124 aa7.15□□□□□ -1.26
GTF3C1-210ENST00000569394 OR4A4PQ8NGN8 299 aa7.15□□□□□ -1.26
GTF3C1-210ENST00000569394 ZNF251Q9BRH9 671 aa7.15□□□□□ -1.26
GTF3C1-210ENST00000569394 PIPOXQ9P0Z9 390 aa7.15□□□□□ -1.26
GTF3C1-210ENST00000569394 MRPS7Q9Y2R9 242 aaKnown RBP7.15□□□□□ -1.26
GTF3C1-210ENST00000569394 A3GALT2U3KPV4 340 aa7.15□□□□□ -1.26
GTF3C1-210ENST00000569394 PSMB11A5LHX3 300 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 TXNL1O43396 289 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 KIR2DS1Q14954 304 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 C2orf68Q2NKX9 166 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 OR2B11Q5JQS5 317 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 C18orf65Q6ZTR6 163 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 GPR141Q7Z602 305 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 OR13F1Q8NGS4 319 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 ABHD5Q8WTS1 349 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 EDARADDQ8WWZ3 215 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 PTX4Q96A99 478 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 R3HDM4Q96D70 268 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 GPHA2Q96T91 129 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 HSPB9Q9BQS6 159 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 MRPS26Q9BYN8 205 aaKnown RBP7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 FBXL15Q9H469 300 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 DIABLOQ9NR28 239 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 PLSCR3Q9NRY6 295 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 MGAT4AQ9UM21 535 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 ETV7Q9Y603 341 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 WSB1Q9Y6I7 421 aa7.14□□□□□ -1.27
GTF3C1-210ENST00000569394 TRIM64CA6NLI5 447 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 M0QZK8 103 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 HPGDSO60760 199 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 PROP1O75360 226 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 TUSC2O75896 110 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 EIF4EP06730 217 aaKnown RBP7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 SOX6P35712 828 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 ZNF137PP52743 207 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 ARPC4P59998 168 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 RPS16P62249 146 aaKnown RBP7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 EBI3Q14213 229 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 TCTEX1D4Q5JR98 221 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 UBE2NLQ5JXB2 153 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 TMEM69Q5SWH9 247 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 SNX29P2Q8IUI4 249 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 CLVS1Q8IUQ0 354 aaPredicted RBP7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 FOXRED2Q8IWF2 684 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 Q8N6K4 173 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 ZNF383Q8NA42 475 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 OR4X2Q8NGF9 303 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 CASTOR1Q8WTX7 329 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 ANAPC16Q96DE5 110 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 S100A16Q96FQ6 103 aaKnown RBP7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 C5orf30Q96GV9 206 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 AGMATQ9BSE5 352 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 WNT10AQ9GZT5 417 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 DCSTAMPQ9H295 470 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 PARP11Q9NR21 331 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 SDHAF2Q9NX18 166 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 KIAA1456Q9P272 454 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 ZNF107Q9UII5 783 aaPredicted RBP7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 SPATA2Q9UM82 520 aa7.13□□□□□ -1.27
GTF3C1-210ENST00000569394 TRBV6-7A0A0A0MS04 114 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 NUDT19A8MXV4 375 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FAM25AB3EWG3 89 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FAM25CB3EWG5 89 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FAM25GB3EWG6 89 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 G3V318 75 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 H0YJW9 148 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FCN1O00602 326 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 NBR2O15453 112 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FGF16O43320 207 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 TFAP2AP05549 437 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 PF4V1P10720 104 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FXYD4P59646 89 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 GNB1P62873 340 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 ECSCRQ19T08 205 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 REC114Q7Z4M0 266 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 STPG2Q8N412 459 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 BVESQ8NE79 360 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 SLC25A46Q96AG3 418 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 DUX3Q96PT4 197 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 DCUN1D5Q9BTE7 237 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 FAM103A1Q9BTL3 118 aaKnown RBP7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 ABCG5Q9H222 651 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 MMP27Q9H306 513 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 AUNIPQ9H7T9 357 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 SLC35D1Q9NTN3 355 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 LIN7CQ9NUP9 197 aaKnown RBP7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 WASHC3Q9Y3C0 194 aa7.12□□□□□ -1.27
GTF3C1-210ENST00000569394 IGKV1D-13A0A0B4J2D9 117 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 TNFSF12O43508 249 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 SCGNO76038 276 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 IGHG2P01859 326 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 APOA2P02652 100 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 PMP2P02689 132 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 PRB2P02812 416 aaPredicted RBP7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 IGKV1-16P04430 117 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 APELAP0DMC3 54 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 IGKV1-13P0DP09 117 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms