RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TIMM22Q9Y584 194 aa2.36□□□□□ -2.03
HMGB1P6-201ENST00000569046 CACNG2Q9Y698 323 aa2.36□□□□□ -2.03
HMGB1P6-201ENST00000569046 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
HMGB1P6-201ENST00000569046 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
HMGB1P6-201ENST00000569046 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 NUP214P35658 2090 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 PLXNB1O43157 2135 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 IGLV3-32A0A0A0MS00 114 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 IGHV7-81A0A0B4J1V7 117 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ZNF780AO75290 641 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 MRPL33O75394 65 aaKnown RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 KCNK2O95069 426 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 PSMG1O95456 288 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ATP6V1G2O95670 118 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 IGHV3-48P01763 117 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 CECR9P0C854 216 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 PGA5P0DJD9 388 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 IGFBP3P17936 291 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 PRTN3P24158 256 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 GNRHRP30968 328 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 MPIP34949 423 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 P2RX1P51575 399 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 DLX1P56177 255 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 PRPS1P60891 318 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 TSPAN5P62079 268 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 CACNG7P62955 275 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 QPRTQ15274 297 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 BSXQ3C1V8 233 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 OR10J3Q5JRS4 329 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 STEAP4Q687X5 459 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 OR2T5Q6IEZ7 315 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 CGB2Q6NT52 195 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 C2orf66Q6UXQ4 117 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 OAFQ86UD1 273 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 NKAPP1Q8N9T2 125 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 OR2T29Q8NH02 315 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ZNF675Q8TD23 568 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 GEMIN6Q8WXD5 167 aaKnown RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 CDS1Q92903 461 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 TMEM230Q96A57 120 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 FLYWCH2Q96CP2 140 aaKnown RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 LRRC58Q96CX6 371 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 SGTBQ96EQ0 304 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 TSPAN32Q96QS1 320 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ZNF184Q99676 751 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 GPR22Q99680 433 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 Q9H3A6 140 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 POPDC3Q9HBV1 291 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ACOT13Q9NPJ3 140 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 MMP26Q9NRE1 261 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 VAPAQ9P0L0 249 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 OPN4Q9UHM6 478 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 BTNL2Q9UIR0 455 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ZNF225Q9UK10 706 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 PCTPQ9UKL6 214 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 ACOT9Q9Y305 439 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 SNX24Q9Y343 169 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 KLF12Q9Y4X4 402 aa2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 POLR3HQ9Y535 204 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P6-201ENST00000569046 KMT2CQ8NEZ4 4911 aaKnown RBP2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 IGLV8-61A0A075B6I0 122 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 IGLV1-36A0A0B4J1U3 117 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 TMEM213A2RRL7 107 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 CLDN24A6NM45 220 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 TRAPPC2LH3BP13 241 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 CLDN34H7C241 214 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 MANBAO00462 879 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 PIN1P1O15428 100 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 ATP8B1O43520 1251 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SHOX2O60902 331 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SUPT7LO94864 414 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SEMA3DO95025 777 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 HPRT1P00492 218 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 C1QCP02747 245 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SEMG1P04279 462 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 GIPP09681 153 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 GKN3PP0CG01 181 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 PGA4P0DJD7 388 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 PGA3P0DJD8 388 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 OR5H8P0DN80 308 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 COX5BP10606 129 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 PSKH1P11801 424 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 ZNF19P17023 458 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 HRH1P35367 487 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 GGT2P36268 569 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 RGS6P49758 472 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 PPOXP50336 477 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SLC25A1P53007 311 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 AQP5P55064 265 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 FGF8P55075 233 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 FOXA1P55317 472 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 ZNF121P58317 390 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 CCL8P80075 99 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 GLO1Q04760 184 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 KIAA0087Q14695 138 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SLC9A3R2Q15599 337 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 TRAM1Q15629 374 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 POU2AF1Q16633 256 aa2.34□□□□□ -2.03
HMGB1P6-201ENST00000569046 SPRNQ5BIV9 151 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms