RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 LUMP51884 338 aaPredicted RBP8.78□□□□□ -1
CDH3-206ENST00000567674 GNMTQ14749 295 aa8.78□□□□□ -1
CDH3-206ENST00000567674 PLAC9Q5JTB6 97 aa8.78□□□□□ -1
CDH3-206ENST00000567674 FOXB2Q5VYV0 432 aa8.78□□□□□ -1
CDH3-206ENST00000567674 UBALD1Q8TB05 177 aa8.78□□□□□ -1
CDH3-206ENST00000567674 KCTD7Q96MP8 289 aa8.78□□□□□ -1
CDH3-206ENST00000567674 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
CDH3-206ENST00000567674 MRPL20Q9BYC9 149 aaKnown RBP8.78□□□□□ -1
CDH3-206ENST00000567674 C11orf54Q9H0W9 315 aaPredicted RBP8.78□□□□□ -1
CDH3-206ENST00000567674 STUB1Q9UNE7 303 aa8.78□□□□□ -1
CDH3-206ENST00000567674 SSR3Q9UNL2 185 aa8.78□□□□□ -1
CDH3-206ENST00000567674 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
CDH3-206ENST00000567674 TRBV6-7A0A0A0MS04 114 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 ZNF736B4DX44 427 aaPredicted RBP8.77□□□□□ -1.01
CDH3-206ENST00000567674 H0YJW9 148 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 H3BUA1 57 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 CCL24O00175 119 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 MFNGO00587 321 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 RRHO14718 337 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 FABP7O15540 132 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 KCTD21Q4G0X4 260 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 KHDC1LQ5JSQ8 128 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 TMEM65Q6PI78 240 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 ZNF773Q6PK81 442 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 ETV3LQ6ZN32 361 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 CROCCP3Q8IVE0 287 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 OR5M8Q8NGP6 311 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 OR10J5Q8NHC4 309 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 ADTRPQ96IZ2 230 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 KCNK7Q9Y2U2 307 aa8.77□□□□□ -1.01
CDH3-206ENST00000567674 IGHV7-81A0A0B4J1V7 117 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 A0A1W2PRX2 142 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 SH2D7A6NKC9 451 aaPredicted RBP8.76□□□□□ -1.01
CDH3-206ENST00000567674 LINC01548A6NM66 108 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 NUDT19A8MXV4 375 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 APOA2P02652 100 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 TFAP2AP05549 437 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 FCGR3AP08637 254 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
CDH3-206ENST00000567674 SCTP09683 121 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 IGLL1P15814 213 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 TALDO1P37837 337 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 CBX3Q13185 183 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 FHL3Q13643 280 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 TIMM50Q3ZCQ8 353 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 FAM53AQ6NSI3 398 aaPredicted RBP8.76□□□□□ -1.01
CDH3-206ENST00000567674 C10orf99Q6UWK7 81 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 Q6ZPA2 131 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 C1QL4Q86Z23 238 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 KLHL30-AS1Q8NEE0 82 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 SETD6Q8TBK2 473 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 HSPB9Q9BQS6 159 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 SLA2Q9H6Q3 261 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 AURKAIP1Q9NWT8 199 aaPredicted RBP8.76□□□□□ -1.01
CDH3-206ENST00000567674 TXNL4BQ9NX01 149 aaKnown RBP8.76□□□□□ -1.01
CDH3-206ENST00000567674 VSIG4Q9Y279 399 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 NUBP2Q9Y5Y2 271 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 ETV7Q9Y603 341 aa8.76□□□□□ -1.01
CDH3-206ENST00000567674 TRAV41A0A0B4J266 112 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 OR8U8P0C7N1 319 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 OR3A3P47888 321 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 RAB9AP51151 201 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 CLDN12P56749 244 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 MSMO1Q15800 293 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 MOGAT2Q3SYC2 334 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 C19orf54Q5BKX5 351 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 VAX1Q5SQQ9 334 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 C9orf66Q5T8R8 295 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 HES5Q5TA89 166 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 HACD4Q5VWC8 232 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 C22orf42Q6IC83 251 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 ZNF491Q8N8L2 437 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 MRAPQ8TCY5 172 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 FLYWCH2Q96CP2 140 aaKnown RBP8.75□□□□□ -1.01
CDH3-206ENST00000567674 RDH8Q9NYR8 311 aa8.75□□□□□ -1.01
CDH3-206ENST00000567674 IGKV1-6A0A0C4DH72 117 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 H7C2Y5 167 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 I3L521 148 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 PROP1O75360 226 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 RPLP1P05386 114 aaKnown RBP8.74□□□□□ -1.01
CDH3-206ENST00000567674 PSMB9P28065 219 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 CX3CL1P78423 397 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 KIAA0141Q14154 515 aaPredicted RBP8.74□□□□□ -1.01
CDH3-206ENST00000567674 FAM131AQ6UXB0 335 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 RAX2Q96IS3 184 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 ABHD14BQ96IU4 210 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 KCNK15Q9H427 330 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
CDH3-206ENST00000567674 FOXA2Q9Y261 457 aaPredicted RBP8.74□□□□□ -1.01
CDH3-206ENST00000567674 SHISA3A0PJX4 238 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 ATP6V0E1O15342 81 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 CREBL2O60519 120 aaPredicted RBP8.73□□□□□ -1.01
CDH3-206ENST00000567674 GNB3P16520 340 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 ARFRP1Q13795 201 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 PLGLAQ15195 96 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 PSG5Q15238 335 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 RTL8BQ17RB0 113 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 RPL39P5Q59GN2 51 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms