RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TFAP2AP05549 437 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 GLAP06280 429 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 ZP3P21754 424 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 CD40LGP29965 261 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 OR10K2Q6IF99 312 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 GTSCR1Q86UQ5 136 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 SETD6Q8TBK2 473 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 FAAP24Q9BTP7 215 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 HIPK2Q9H2X6 1198 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 KCNK15Q9H427 330 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 PIPOXQ9P0Z9 390 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 H0Y980 276 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 IGKV1-16P04430 117 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 CSN3P07498 182 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
PALB2-205ENST00000567003 FXYD3Q14802 87 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 YIF1BQ5BJH7 314 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 C6orf201Q7Z4U5 140 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 SVOPQ8N4V2 548 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 OR5AN1Q8NGI8 311 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 ABRACLQ9P1F3 81 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 CEPT1Q9Y6K0 416 aa11.76□□□□□ -0.53
PALB2-205ENST00000567003 SLC25A17O43808 307 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 RBBP9O75884 186 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 DCKP27707 260 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 CAPGP40121 348 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 RPS16P62249 146 aaKnown RBP11.75□□□□□ -0.53
PALB2-205ENST00000567003 PJVKQ0ZLH3 352 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 DYRK1AQ13627 763 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 DERL3Q96Q80 235 aa11.75□□□□□ -0.53
PALB2-205ENST00000567003 CHMP1AQ9HD42 196 aaPredicted RBP11.75□□□□□ -0.53
PALB2-205ENST00000567003 DYNC1I1O14576 645 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 SLC22A1O15245 554 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 PROP1O75360 226 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
PALB2-205ENST00000567003 APELAP0DMC3 54 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 CPEP16870 476 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 MC5RP33032 325 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 RASSF2P50749 326 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 CD81P60033 236 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 LCN12Q6JVE5 192 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 LINC00322Q6ZN03 302 aaPredicted RBP11.74□□□□□ -0.53
PALB2-205ENST00000567003 ZNF383Q8NA42 475 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 NEDD4LQ96PU5 975 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 NICN1Q9BSH3 213 aa11.74□□□□□ -0.53
PALB2-205ENST00000567003 HDHD3Q9BSH5 251 aaPredicted RBP11.74□□□□□ -0.53
PALB2-205ENST00000567003 C11orf54Q9H0W9 315 aaPredicted RBP11.74□□□□□ -0.53
PALB2-205ENST00000567003 DIMT1Q9UNQ2 313 aaKnown RBP11.74□□□□□ -0.53
PALB2-205ENST00000567003 HECTD4Q9Y4D8 3996 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 SHISA3A0PJX4 238 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 RBMY1BA6NDE4 496 aaKnown RBP11.73□□□□□ -0.53
PALB2-205ENST00000567003 RBMY1EA6NEQ0 496 aaKnown RBP11.73□□□□□ -0.53
PALB2-205ENST00000567003 BRI3O95415 125 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 RBMY1DP0C7P1 496 aaKnown RBP11.73□□□□□ -0.53
PALB2-205ENST00000567003 MYL12AP19105 171 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 HTR2CP28335 458 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 ZNF880Q6PDB4 577 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 Q8N402 240 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 ZNF485Q8NCK3 441 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 TSNAXQ99598 290 aaKnown RBP11.73□□□□□ -0.53
PALB2-205ENST00000567003 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
PALB2-205ENST00000567003 EXOSC1Q9Y3B2 195 aaKnown RBP11.73□□□□□ -0.53
PALB2-205ENST00000567003 LRRC42Q9Y546 428 aa11.73□□□□□ -0.53
PALB2-205ENST00000567003 A0A0A6YYD4 124 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 CNIH1O95406 144 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 NAPSAO96009 420 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 INSL4Q14641 139 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 CDH26Q8IXH8 852 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 BVESQ8NE79 360 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 RNF5Q99942 180 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 C9orf16Q9BUW7 83 aa11.72□□□□□ -0.53
PALB2-205ENST00000567003 H3BUA1 57 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 SPDEFO95238 335 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 CD7P09564 240 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 EDN2P20800 178 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 CEACAM6P40199 344 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 RPS27AP62979 156 aaKnown RBP11.71□□□□□ -0.53
PALB2-205ENST00000567003 RPEL1Q2QD12 228 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 MOGAT2Q3SYC2 334 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 RNLSQ5VYX0 342 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 ZNF343Q6P1L6 599 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 NEURL2Q9BR09 285 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 UQCC2Q9BRT2 126 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 TINAGL1Q9GZM7 467 aaPredicted RBP11.71□□□□□ -0.53
PALB2-205ENST00000567003 COA4Q9NYJ1 87 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 SELENOKQ9Y6D0 94 aa11.71□□□□□ -0.53
PALB2-205ENST00000567003 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
PALB2-205ENST00000567003 ATP5HO75947 161 aa11.7□□□□□ -0.54
PALB2-205ENST00000567003 TPPPO94811 219 aa11.7□□□□□ -0.54
PALB2-205ENST00000567003 MECP2P51608 486 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms