RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 GALNT10Q86SR1 603 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 HS3ST5Q8IZT8 346 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 ZNF567Q8N184 647 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 OR2AE1Q8NHA4 323 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 SCGB1C1Q8TD33 95 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 LMX1AQ8TE12 382 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.39□□□□□ -2.19
PALB2-203ENST00000565038 YPEL4Q96NS1 127 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 OR8B2Q96RD0 313 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 ZNF436Q9C0F3 470 aaPredicted RBP1.39□□□□□ -2.19
PALB2-203ENST00000565038 GOLPH3Q9H4A6 298 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 TAS2R13Q9NYV9 303 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 NAGKQ9UJ70 344 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 ENPP5Q9UJA9 477 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 EPG5Q9HCE0 2579 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 CHD8Q9HCK8 2581 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 CHD6Q8TD26 2715 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 MIA3Q5JRA6 1907 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 NBPF19A0A087WUL8 3843 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 DOCK2Q92608 1830 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CEP250Q9BV73 2442 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 SCN10AQ9Y5Y9 1956 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 FBN3Q75N90 2809 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 ASXL3Q9C0F0 2248 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 TRGV4A0A0C4DH28 118 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 UPK2O00526 184 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 SLC16A4O15374 487 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 DEXIO95424 95 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CST4P01036 141 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 NPPAP01160 153 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 SOD3P08294 240 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CTLA4P16410 223 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 PRTN3P24158 256 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CASP1P29466 404 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 RPA3P35244 121 aaPredicted RBP1.38□□□□□ -2.19
PALB2-203ENST00000565038 HTR2BP41595 481 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 FLOT2Q14254 428 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 ZBTB6Q15916 424 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 BCL2A1Q16548 175 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CEACAM16Q2WEN9 425 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 LYZL2Q7Z4W2 148 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 DEFB119Q8N690 84 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 ZNF738Q8NE65 137 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 OR4K17Q8NGC6 315 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 TMEM239Q8WW34 195 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 FGF13Q92913 245 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CYTH2Q99418 400 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 LXNQ9BS40 222 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 TAPBPLQ9BX59 468 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 BBS2Q9BXC9 721 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 RBM12B-AS1Q9P1G2 102 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CYB5R1Q9UHQ9 305 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 BTRCQ9Y297 605 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 FAM186AA6NE01 2351 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 RBBP6Q7Z6E9 1792 aaKnown RBP1.38□□□□□ -2.19
PALB2-203ENST00000565038 ZFYVE26Q68DK2 2539 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 LCTP09848 1927 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CELSR3Q9NYQ7 3312 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 ATAD5Q96QE3 1844 aa1.38□□□□□ -2.19
PALB2-203ENST00000565038 CEP295Q9C0D2 2601 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 CFAP47Q6ZTR5 3102 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 SPEGQ15772 3267 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 M0QXV9 152 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 M0QZ92 97 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 UBDO15205 165 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 SHOX2O60902 331 aaPredicted RBP1.37□□□□□ -2.19
PALB2-203ENST00000565038 MYO1DO94832 1006 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 LYPLA2O95372 231 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 PRB1P04280 392 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 RD3LP0DJH9 198 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 GTF2F2P13984 249 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 NQO2P16083 231 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 SPNP16150 400 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 HMGA1P17096 107 aaKnown RBP1.37□□□□□ -2.19
PALB2-203ENST00000565038 SYT1P21579 422 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 PSMB9P28065 219 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 MAGEA6P43360 314 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 CBX5P45973 191 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 TTPAP49638 278 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 AQP5P55064 265 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 HBG1P69891 147 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 HBG2P69892 147 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 XRCC4Q13426 336 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 HTR4Q13639 388 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 BSXQ3C1V8 233 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 N4BP2L1Q5TBK1 243 aaPredicted RBP1.37□□□□□ -2.19
PALB2-203ENST00000565038 ERICH5Q6P6B1 374 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 DPPA2Q7Z7J5 298 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 SELENOHQ8IZQ5 122 aaKnown RBP1.37□□□□□ -2.19
PALB2-203ENST00000565038 GATD1Q8NB37 220 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 TMEM161BQ8NDZ6 487 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 OR5B17Q8NGF7 314 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 OR5P2Q8WZ92 322 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 C8orf76Q96K31 380 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 PGLYRP3Q96LB9 341 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 SERPINB11Q96P15 392 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 PITX2Q99697 317 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 NDEL1Q9GZM8 345 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 MFSD1Q9H3U5 465 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 FBXL15Q9H469 300 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms