RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RPS19BP1Q86WX3 136 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3B-206ENST00000564844 RAC3P60763 192 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 NAGKQ9UJ70 344 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 CBY1Q9Y3M2 126 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 ZNF716A6NP11 495 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 C11orf94C9JXX5 98 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 CEBPDP49716 269 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 ERVFC1-1P60608 527 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 SERF2P84101 59 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 ACTL10Q5JWF8 245 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 BEND2Q8NDZ0 799 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 OR1L1Q8NH94 360 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 CPT1CQ8TCG5 803 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 ABHD14BQ96IU4 210 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 IRF2P14316 349 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 CEACAM6P40199 344 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 TDGF1P3P51864 188 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 GBGT1Q8N5D6 347 aa17.34■□□□□ 0.37
MAP1LC3B-206ENST00000564844 ZG16O60844 167 aa17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 IGLV2-14P01704 120 aa17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 CA6P23280 308 aa17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 DNLZQ5SXM8 178 aa17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 PYGO2Q9BRQ0 406 aa17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 FAM103A1Q9BTL3 118 aaKnown RBP17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 MANBALQ9NQG1 85 aa17.33■□□□□ 0.37
MAP1LC3B-206ENST00000564844 FRMD6-AS1P0C7T7 363 aa17.33■□□□□ 0.36
MAP1LC3B-206ENST00000564844 SGMS2Q8NHU3 365 aa17.33■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DLL3Q9NYJ7 618 aa17.33■□□□□ 0.36
MAP1LC3B-206ENST00000564844 NCKAP5O14513 1909 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 EDDM3BP56851 147 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TMEM208Q9BTX3 173 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PARD6AQ9NPB6 346 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 HPRT1P00492 218 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 VN1R17PQ8TDU5 208 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 ACY3Q96HD9 319 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PSMG3Q9BT73 122 aaPredicted RBP17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TMEM9BQ9NQ34 198 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DUXBA0A1W2PPF3 345 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DEGS1O15121 323 aa17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PINX1Q96BK5 328 aaKnown RBP17.32■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CBR3O75828 277 aa17.31■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CBLN1P23435 193 aa17.31■□□□□ 0.36
MAP1LC3B-206ENST00000564844 F2Z2F3 143 aa17.31■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CDKN1AP38936 164 aa17.31■□□□□ 0.36
MAP1LC3B-206ENST00000564844 KMT5CQ86Y97 462 aa17.31■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TPRP12270 2363 aaKnown RBP17.31■□□□□ 0.36
MAP1LC3B-206ENST00000564844 MRPL33O75394 65 aaKnown RBP17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 HOXA6P31267 233 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 LPAL2Q16609 132 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 LTC4SQ16873 150 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 GGNQ86UU5 652 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 NEIL1Q96FI4 390 aaPredicted RBP17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DIRC2Q96SL1 478 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 ZNF576Q9H609 170 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 UMODP07911 640 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CTXN2P0C2S0 81 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 ADMP35318 185 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 FAM58AQ8N1B3 248 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DRAM1Q8N682 238 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 GOLT1BQ9Y3E0 138 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 SPTBN2O15020 2390 aa17.3■□□□□ 0.36
MAP1LC3B-206ENST00000564844 FKBP2P26885 142 aaKnown RBP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 GDF1P27539 372 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 OR3A1P47881 315 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PCBD1P61457 104 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CEACAM21Q3KPI0 293 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 ZNF709Q8N972 641 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 IFI44Q8TCB0 444 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 SLC17A3O00476 420 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TNRC18O15417 2968 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 RBFOX2O43251 390 aaKnown RBP eCLIP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 IGHV3-13P01766 116 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 IGHV3-7P01780 117 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 C3AR1Q16581 482 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 ACOT6Q3I5F7 207 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 MAJINQ3KP22 176 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 COA6Q5JTJ3 125 aaKnown RBP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 KCNIP4Q6PIL6 250 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TGIF2LYQ8IUE0 185 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 REPIN1Q9BWE0 567 aaKnown RBP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 C1QTNF5Q9BXJ0 243 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CTXND1A0A1B0GTU2 59 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 GNB1P62873 340 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DMRTA1Q5VZB9 504 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 CXorf67Q86X51 503 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 OR5A2Q8NGI9 324 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 ZDHHC11Q9H8X9 412 aa17.29■□□□□ 0.36
MAP1LC3B-206ENST00000564844 IGHV1-45A0A0A0MS14 117 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 DEFB108AA8MXU0 73 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PPP1CBP62140 327 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 TPRX1Q8N7U7 411 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 FAM234AQ9H0X4 552 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 P04436 131 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 RPL30P62888 115 aaKnown RBP17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 SLC35B1P78383 322 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 RAB30Q15771 203 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 C1orf194Q5T5A4 169 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 HSPB9Q9BQS6 159 aa17.28■□□□□ 0.36
MAP1LC3B-206ENST00000564844 IGHV3-43A0A0B4J1X8 118 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms