RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 HSMCR30P0CW71 290 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 TMEM50BP56557 158 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 HLA-DRB3P79483 266 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 PLGLAQ15195 96 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 PRSS48Q7RTY5 328 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 TSNAXQ99598 290 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 TOLLIPQ9H0E2 274 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 GNB4Q9HAV0 340 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 ZNF221Q9UK13 617 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 RAB22AQ9UL26 194 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 DNAH9Q9NYC9 4486 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 TRDCB7Z8K6 153 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 LINC01619G3V211 115 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 OVOL1O14753 267 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 TAGLNQ01995 201 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 P2RY14Q15391 338 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 PDPNQ86YL7 162 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 OR4A4PQ8NGN8 299 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 FAM3DQ96BQ1 224 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 FLYWCH2Q96CP2 140 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 ABHD14BQ96IU4 210 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 CYYR1Q96J86 154 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 TMEM68Q96MH6 324 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 MGLLQ99685 303 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 CMSS1Q9BQ75 279 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 VCX3BQ9H321 246 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 FBXL15Q9H469 300 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 SLA2Q9H6Q3 261 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 AK6Q9Y3D8 172 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 U3KQK5 164 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 V9GY05 133 aa9.45□□□□□ -0.9
GTF3C1-204ENST00000564664 A0A1W2PN81 502 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 FCN1O00602 326 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 PDCD5O14737 125 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 DENRO43583 198 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 APOA2P02652 100 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 HSPB1P04792 205 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 TFAP2AP05549 437 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 SCTP09683 121 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 EGR2P11161 476 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 CALRP27797 417 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 CHRNA7P36544 502 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 LGALS7P47929 136 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 VEGFCP49767 419 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 AQP4P55087 323 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 GNB1P62873 340 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 MRPS15P82914 257 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 PSG5Q15238 335 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 ACTBL2Q562R1 376 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 ASPHD1Q5U4P2 390 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 PPP1R27Q86WC6 154 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 DCUN1D4Q92564 292 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 ARHGAP5-AS1Q96IT6 56 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 PRR25Q96S07 402 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 GFI1Q99684 422 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 PECRQ9BY49 303 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 TPSG1Q9NRR2 321 aa9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 METTL1Q9UBP6 276 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 NKX1-2Q9UD57 310 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-204ENST00000564664 TRAV1-2A0A0B4J238 106 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 H3BUA1 57 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 LDLRAD4O15165 306 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 SOX15O60248 233 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 PROP1O75360 226 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 BRI3O95415 125 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 CRHBPP24387 322 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 HSPA13P48723 471 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 RPS16P62249 146 aaKnown RBP9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 RPS25P62851 125 aaKnown RBP9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 NDPQ00604 133 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 FABP5Q01469 135 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 ECSCRQ19T08 205 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 UNQ5815/PRO19632Q6UWF5 114 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 GLDNQ6ZMI3 551 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 ABHD5Q8WTS1 349 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 RHOVQ96L33 236 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 HDHD3Q9BSH5 251 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 CCDC90BQ9GZT6 254 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 KCNK15Q9H427 330 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 BATF3Q9NR55 127 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 RDH8Q9NYR8 311 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 OR1A1Q9P1Q5 309 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 SMAD5-AS1Q9Y6J3 95 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 NBEAL2Q6ZNJ1 2754 aa9.43□□□□□ -0.9
GTF3C1-204ENST00000564664 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 CD3GP09693 182 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 OR8U9P0C7N5 309 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 RRASP10301 218 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 GALP22466 123 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 GADD45AP24522 165 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 ARL6IP1Q15041 203 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 MOGAT2Q3SYC2 334 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms