RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 MRPS26Q9BYN8 205 aaKnown RBP12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 CST11Q9H112 138 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 KCNK15Q9H427 330 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 FOXA2Q9Y261 457 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 RRHO14718 337 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 HSMCR30P0CW71 290 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 HAPLN4Q86UW8 402 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 NKAIN3Q8N8D7 197 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 FAM103A1Q9BTL3 118 aaKnown RBP12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 GHRLQ9UBU3 117 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 BIRC6Q9NR09 4857 aa12.93□□□□□ -0.34
HDGFL3-203ENST00000563404 H0YJW9 148 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 HTR2CP28335 458 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 LIPKQ5VXJ0 399 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 ZNF880Q6PDB4 577 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 CD200R1LQ6Q8B3 271 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 IL1F10Q8WWZ1 152 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 NEDD4LQ96PU5 975 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 NICN1Q9BSH3 213 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 NDUFB11Q9NX14 153 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 SLC23A1Q9UHI7 598 aa12.92□□□□□ -0.34
HDGFL3-203ENST00000563404 RAB29O14966 203 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 NAPSAO96009 420 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 SMIM18P0DKX4 95 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 MAPK3P27361 379 aaPredicted RBP12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 PSMB9P28065 219 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 RPS27AP62979 156 aaKnown RBP12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 UNC119Q13432 240 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 PPP1R27Q86WC6 154 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 TCTEX1D1Q8N7M0 179 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 ABHD14BQ96IU4 210 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 RHOVQ96L33 236 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 MS4A10Q96PG2 267 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 AGMATQ9BSE5 352 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 PIPOXQ9P0Z9 390 aa12.91□□□□□ -0.34
HDGFL3-203ENST00000563404 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 OR5H14A6NHG9 310 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 PROP1O75360 226 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 HSPB1P04792 205 aaKnown RBP12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 OR8U9P0C7N5 309 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 LYL1P12980 280 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 PLGLAQ15195 96 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 NEDD8Q15843 81 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 SSX1Q16384 188 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 ACSM3Q53FZ2 586 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 ACTBL2Q562R1 376 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 UNQ5815/PRO19632Q6UWF5 114 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 Q8N1Y9 231 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 OR5AN1Q8NGI8 311 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 ABHD5Q8WTS1 349 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 TM2D1Q9BX74 207 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 ABRACLQ9P1F3 81 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 STEAP1Q9UHE8 339 aa12.9□□□□□ -0.34
HDGFL3-203ENST00000563404 TFAP2AP05549 437 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 UBBP0CG47 229 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 LINC00205P59089 165 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 QRFPP83859 136 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 PITPNAQ00169 270 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 PSG5Q15238 335 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 C1orf100Q5SVJ3 147 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 LFNGQ8NES3 379 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 HDHD3Q9BSH5 251 aaPredicted RBP12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 OR1A1Q9P1Q5 309 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 WASHC3Q9Y3C0 194 aa12.89□□□□□ -0.35
HDGFL3-203ENST00000563404 TRDV1A0A1B0GX56 115 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 H7C2Y5 167 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 CA2P00918 260 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 GSTP1P09211 210 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 IGHV4-30-4P0DP06 118 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 FGF9P31371 208 aaPredicted RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 RPL5P46777 297 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 TPPP2P59282 170 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 TMEM267Q0VDI3 215 aaPredicted RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 ZFAND6Q6FIF0 208 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 DRAXINQ8NBI3 349 aaPredicted RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 SETD6Q8TBK2 473 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 TMED9Q9BVK6 235 aa12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 CHMP1AQ9HD42 196 aaPredicted RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 METTL1Q9UBP6 276 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-203ENST00000563404 LCE6AA0A183 80 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms