RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ITGB1BP1O14713 200 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 NMBP08949 121 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 GPR12P47775 334 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 TMEM33P57088 247 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 BRWD1-AS2P59051 145 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 TLE4Q04727 773 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 C1orf229Q6ZS94 237 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF439Q8NDP4 499 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 THAP6Q8TBB0 222 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 LRRC20Q8TCA0 184 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 TIMD4Q96H15 378 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 ABHD14AQ9BUJ0 271 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 LIN7CQ9NUP9 197 aaKnown RBP14.84□□□□□ -0.03
COMMD4-208ENST00000563220 LPAR3Q9UBY5 353 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 KCNAB3O43448 404 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 DLX6P56179 175 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 TMEM155Q4W5P6 130 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 NMSQ5H8A3 153 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 HEPN1Q6WQI6 88 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 FAM216AQ8WUB2 273 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 REG4Q9BYZ8 158 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 OR5AC2Q9NZP5 309 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 TNFSF18Q9UNG2 199 aa14.83□□□□□ -0.04
COMMD4-208ENST00000563220 DUXBA0A1W2PPF3 345 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 LINC00473A8K010 186 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 RNF212BA8MTL3 300 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 CLDN1O95832 211 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 VDAC1P21796 283 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 EFNA4P52798 201 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 ZNF345Q14585 488 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 TMEM30BQ3MIR4 351 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 RPL39P5Q59GN2 51 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 OR10A7Q8NGE5 316 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 SUN5Q8TC36 379 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 PCNPQ8WW12 178 aaKnown RBP14.82□□□□□ -0.04
COMMD4-208ENST00000563220 MIOXQ9UGB7 285 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 A0A0G2JRQ6 117 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 MFSD2BA6NFX1 497 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 C17orf98A8MV24 154 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 RAMP3O60896 148 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 GNG10P50151 68 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 RAB7AP51149 207 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 ZNF66Q6ZN08 573 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 IGFBPL1Q8WX77 278 aa14.82□□□□□ -0.04
COMMD4-208ENST00000563220 UBR5O95071 2799 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-208ENST00000563220 ARID1AO14497 2285 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 OR2F2O95006 317 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 MBPP02686 304 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-208ENST00000563220 LYL1P12980 280 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 DUTP33316 252 aaKnown RBP14.81□□□□□ -0.04
COMMD4-208ENST00000563220 LPAR6P43657 344 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 S100A10P60903 97 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 UBA52P62987 128 aaKnown RBP14.81□□□□□ -0.04
COMMD4-208ENST00000563220 OR2F1Q13607 317 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 OR2B11Q5JQS5 317 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 WDR25Q64LD2 544 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-208ENST00000563220 PRSS54Q6PEW0 395 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 FOXRED2Q8IWF2 684 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 ODF3L1Q8IXM7 274 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 KCNRGQ8N5I3 272 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 C11orf42Q8N5U0 333 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 OR8B3Q8NGG8 313 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 OR4D5Q8NGN0 318 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 TCTEX1D2Q8WW35 142 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 NEIL1Q96FI4 390 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-208ENST00000563220 OR8B2Q96RD0 313 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 GAB2Q9UQC2 676 aa14.81□□□□□ -0.04
COMMD4-208ENST00000563220 TRBV23-1A0A0A0MS06 115 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 RNF222A6NCQ9 220 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 CATR1Q13166 79 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 NCR3LG1Q68D85 454 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 OR1S1Q8NH92 325 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 GPR146Q96CH1 333 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 HSD17B10Q99714 261 aaKnown RBP14.8□□□□□ -0.04
COMMD4-208ENST00000563220 ZNRD1Q9P1U0 126 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 CLEC18AA5D8T8 446 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 SCGB1D2O95969 90 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 IGKV1-5P01602 117 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 IZUMO4Q1ZYL8 232 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 MALRD1Q5VYJ5 2156 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 ALKAL2Q6UX46 152 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 SLC25A48Q6ZT89 311 aaKnown RBP14.8□□□□□ -0.04
COMMD4-208ENST00000563220 SPAG16Q8N0X2 631 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 CLEC18CQ8NCF0 446 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 DCUN1D4Q92564 292 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 RRNAD1Q96FB5 475 aaKnown RBP14.8□□□□□ -0.04
COMMD4-208ENST00000563220 ZNF251Q9BRH9 671 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 NARFLQ9H6Q4 476 aa14.8□□□□□ -0.04
COMMD4-208ENST00000563220 M0R1X1 148 aa14.79□□□□□ -0.04
COMMD4-208ENST00000563220 GPR37O15354 613 aa14.79□□□□□ -0.04
COMMD4-208ENST00000563220 ZP3P21754 424 aa14.79□□□□□ -0.04
COMMD4-208ENST00000563220 GPR6P46095 362 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-208ENST00000563220 ZNF816Q0VGE8 651 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-208ENST00000563220 Q6ZRM9 215 aa14.79□□□□□ -0.04
COMMD4-208ENST00000563220 LYG1Q8N1E2 194 aa14.79□□□□□ -0.04
COMMD4-208ENST00000563220 PATZ1Q9HBE1 687 aaKnown RBP14.79□□□□□ -0.04
COMMD4-208ENST00000563220 LSM5Q9Y4Y9 91 aaKnown RBP14.79□□□□□ -0.04
COMMD4-208ENST00000563220 AKAP6Q13023 2319 aa14.79□□□□□ -0.04
COMMD4-208ENST00000563220 SAA2-SAA4A0A096LPE2 208 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 A1L4Q6 167 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms