RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 JOSD2Q8TAC2 188 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 RASL11BQ9BPW5 248 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 OR2H1Q9GZK4 316 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 SPANXA1Q9NS26 97 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 IDI2-AS1Q9NZ38 188 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 B9D1Q9UPM9 204 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 POLR1DQ9Y2S0 133 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 NCKAP5O14513 1909 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 SOCS1O15524 211 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 NEURL1O76050 574 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 CD1AP06126 327 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 SP9P0CG40 484 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 CDK2P24941 298 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 ID3Q02535 119 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 IL17RELQ6ZVW7 336 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 OR2L13Q8N349 312 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 ARPC1AQ92747 370 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 VN1R3Q9BXE9 311 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 SDF2L1Q9HCN8 221 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 DUXBA0A1W2PPF3 345 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 F2Z2F3 143 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 H0YJW9 148 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 RER1O15258 196 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 KLK1P06870 262 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 IL3P08700 152 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 CLDN6P56747 220 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 MALLQ13021 153 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 CR1LQ2VPA4 569 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 C6orf226Q5I0X4 101 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 TTC32Q5I0X7 151 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 FNDC7Q5VTL7 733 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 NPWQ8N729 165 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 NUP43Q8NFH3 380 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 COQ2Q96H96 371 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 SFXN3Q9BWM7 321 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 IL36GQ9NZH8 169 aa7.96□□□□□ -1.13
CDH1-205ENST00000562836 ZNF106Q9H2Y7 1883 aaKnown RBP7.96□□□□□ -1.14
CDH1-205ENST00000562836 TRBV5-3A0A0A0MS03 114 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 FABP2P12104 132 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 PRDX3P30048 256 aaKnown RBP7.96□□□□□ -1.14
CDH1-205ENST00000562836 NTF4P34130 210 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 TNFSF9P41273 254 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 CA7P43166 264 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 SYNPRQ8TBG9 265 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 SH3BGRL3Q9H299 93 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 PRO0628Q9UI54 55 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 PXMP4Q9Y6I8 212 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 TRPM7Q96QT4 1865 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 THSD7AQ9UPZ6 1657 aa7.96□□□□□ -1.14
CDH1-205ENST00000562836 ZNF736B4DX44 427 aaPredicted RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 SIRPB1O00241 398 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 SEC11BP0C7V7 166 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 LINC00869P0C866 280 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 IGLC6P0CF74 106 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 IRF1P10914 325 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 RPL15P61313 204 aaKnown RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 PPP1CAP62136 330 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 FAM27E3Q08E93 113 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 ZNF550Q7Z398 422 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 ACOT1Q86TX2 421 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 SPEM1Q8N4L4 309 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 TMEM54Q969K7 222 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 NMES1Q9C002 83 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 MTFP1Q9UDX5 166 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 GBF1Q92538 1859 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 COL11A2P13942 1736 aaPredicted RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 MIA3Q5JRA6 1907 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 OTOL1A6NHN0 477 aaPredicted RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 CYCSP99999 105 aaKnown RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 OR5H2Q8NGV7 314 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 OR5P3Q8WZ94 311 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 GNPNAT1Q96EK6 184 aaPredicted RBP7.95□□□□□ -1.14
CDH1-205ENST00000562836 FAM173AQ9BQD7 235 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 PRADC1Q9BSG0 188 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 SIP14410 1827 aa7.95□□□□□ -1.14
CDH1-205ENST00000562836 FAM24AA6NFZ4 105 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 NPFFO15130 113 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 KLF7O75840 302 aaPredicted RBP7.94□□□□□ -1.14
CDH1-205ENST00000562836 B3GALT4O96024 378 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 IFITM1P13164 125 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 CRISP2P16562 243 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 FCGR2CP31995 323 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 ZNF74Q16587 644 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 FAM90A2PQ658T7 463 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 ZNF322Q6U7Q0 402 aaPredicted RBP7.94□□□□□ -1.14
CDH1-205ENST00000562836 SLC22A18ASQ8N1D0 253 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 RYBPQ8N488 228 aaPredicted RBP7.94□□□□□ -1.14
CDH1-205ENST00000562836 KRTCAP2Q8N6L1 136 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 ZG16BQ96DA0 208 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 ZBTB45Q96K62 511 aaPredicted RBP7.94□□□□□ -1.14
CDH1-205ENST00000562836 BANF2Q9H503 90 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 ACER3Q9NUN7 267 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 MED31Q9Y3C7 131 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 IRGMA1A4Y4 181 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 RHODO00212 210 aa7.94□□□□□ -1.14
CDH1-205ENST00000562836 TM4SF5O14894 197 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms