RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 A0A1B0GX12 115 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 IQCF5A8MTL0 148 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 A8MWP4 228 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 ELK4P28324 431 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 UGT2B10P36537 528 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 RAB31Q13636 194 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 ZNF470Q6ECI4 717 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 ELP2Q6IA86 826 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 LAIR2Q6ISS4 152 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 DGAT2L6Q6ZPD8 337 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 CALHM3Q86XJ0 350 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 ZIC4Q8N9L1 334 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 DEFB124Q8NES8 71 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 TRNT1Q96Q11 434 aaKnown RBP3.13□□□□□ -1.91
SMG1-204ENST00000561940 TSSK6Q9BXA6 273 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 METTL17Q9H7H0 456 aaPredicted RBP3.13□□□□□ -1.91
SMG1-204ENST00000561940 SPACA1Q9HBV2 294 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 COL11A1P12107 1806 aaPredicted RBP3.13□□□□□ -1.91
SMG1-204ENST00000561940 DOCK2Q92608 1830 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 NAV3Q8IVL0 2385 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 POLQO75417 2590 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 KALRNO60229 2985 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 ABCB11O95342 1321 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 SCN10AQ9Y5Y9 1956 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 CFAP46Q8IYW2 2715 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 IGHV3-21A0A0B4J1V1 117 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 A0A1W2PRG6 482 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 F5H5P2 479 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 H3BQ85 93 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 SULT1C2O00338 296 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 SNAP29O95721 258 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 IGKV1D-33P01593 117 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 IGKV1-33P01594 117 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 SLC2A1P11166 492 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 PTHLHP12272 177 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 PRPS1L1P21108 318 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 COL8A2P25067 703 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 CD34P28906 385 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 ZNF83P51522 516 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 WDR59Q6PJI9 974 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 COMTD1Q86VU5 262 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 PPTC7Q8NI37 304 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 CASTOR1Q8WTX7 329 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 RORBQ92753 470 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 PPWD1Q96BP3 646 aaKnown RBP3.12□□□□□ -1.91
SMG1-204ENST00000561940 MRAP2Q96G30 205 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 OLFM3Q96PB7 478 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 NDEL1Q9GZM8 345 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 GABARAPL1Q9H0R8 117 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 MS4A12Q9NXJ0 267 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 MICAL3Q7RTP6 2002 aa3.12□□□□□ -1.91
SMG1-204ENST00000561940 SPAARA0A1B0GVQ0 90 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 I3L4J1 428 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 K7ERS5 55 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 NDUFS6O75380 124 aaKnown RBP3.11□□□□□ -1.91
SMG1-204ENST00000561940 YEATS4O95619 227 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 GTF2F2P13984 249 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 SPNP16150 400 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 TMEM249Q2WGJ8 235 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 CLEC6AQ6EIG7 209 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 LAMTOR1Q6IAA8 161 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 CLEC20AQ6ZU45 233 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 FAM183BPQ6ZVS7 135 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 ZNF738Q8NE65 137 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 FAM45AQ8TCE6 357 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 PDCD6IPQ8WUM4 868 aaKnown RBP3.11□□□□□ -1.91
SMG1-204ENST00000561940 CCDC127Q96BQ5 260 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 TAS2R1Q9NYW7 299 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 TBL2Q9Y4P3 447 aaKnown RBP3.11□□□□□ -1.91
SMG1-204ENST00000561940 CLUHO75153 1309 aa3.11□□□□□ -1.91
SMG1-204ENST00000561940 DOPEY2Q9Y3R5 2298 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 LRRK2Q5S007 2527 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 SDK1Q7Z5N4 2213 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 IGHV2-26A0A0B4J1V2 119 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 A0A0B4J2C4 111 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 C4orf51C9J302 202 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 IGHMP01871 453 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 CNTFRP26992 372 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 ADORA1P30542 326 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 DEFB134Q4QY38 66 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 FAM19A3Q7Z5A8 133 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 SPATA24Q86W54 205 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 BBS2Q9BXC9 721 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 ZNF391Q9UJN7 358 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 MYH3P11055 1940 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 PTPRSQ13332 1948 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 NID2Q14112 1375 aa3.1□□□□□ -1.91
SMG1-204ENST00000561940 CACNA1EQ15878 2313 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 TRAV8-2A0A0B4J237 113 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 FAM183AA6NL82 134 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 TRPC5OSA6NMA1 111 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 TCF21O43680 179 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 RD3LP0DJH9 198 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 SMIM10L2AP0DMW4 78 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 SMIM10L2BP0DMW5 78 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms