RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 METTL1Q9UBP6 276 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-215ENST00000561187 AK6Q9Y3D8 172 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-215ENST00000561187 CASQ2O14958 399 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 CA2P00918 260 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 LGALS1P09382 135 aaKnown RBP20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 SCTP09683 121 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 UCHL1P09936 223 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 HSMCR30P0CW71 290 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 CLDN12P56749 244 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 RPS25P62851 125 aaKnown RBP20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 HAPLN4Q86UW8 402 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 ZNF429Q86V71 674 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 PPP1R27Q86WC6 154 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 UFD1Q92890 307 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 TPSG1Q9NRR2 321 aa20.9■□□□□ 0.94
SNRPA1-215ENST00000561187 TPPP2P59282 170 aa20.89■□□□□ 0.93
SNRPA1-215ENST00000561187 ACTBL2Q562R1 376 aa20.89■□□□□ 0.93
SNRPA1-215ENST00000561187 LFNGQ8NES3 379 aa20.89■□□□□ 0.93
SNRPA1-215ENST00000561187 VCXQ9H320 206 aa20.89■□□□□ 0.93
SNRPA1-215ENST00000561187 DNAH7Q8WXX0 4024 aa20.89■□□□□ 0.93
SNRPA1-215ENST00000561187 ARSBP15848 533 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 CPEP16870 476 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 VEGFCP49767 419 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 CRIP2P52943 208 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 SBSPONQ8IVN8 264 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 GRPEL2Q8TAA5 225 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 ARHGAP5-AS1Q96IT6 56 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 AGMATQ9BSE5 352 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 URM1Q9BTM9 101 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 NUBP2Q9Y5Y2 271 aa20.88■□□□□ 0.93
SNRPA1-215ENST00000561187 IGKV1-16P04430 117 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 ZBTB25P24278 435 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 PSG5Q15238 335 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 RAB11BQ15907 218 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 OR5AN1Q8NGI8 311 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 EDARADDQ8WWZ3 215 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 C12orf4Q9NQ89 552 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 SCN3BQ9NY72 215 aa20.87■□□□□ 0.93
SNRPA1-215ENST00000561187 MC5RP33032 325 aa20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 RPS16P62249 146 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 TMEM267Q0VDI3 215 aaPredicted RBP20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 SRSF7Q16629 238 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 RNLSQ5VYX0 342 aa20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 TMEM91Q6ZNR0 172 aa20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 TCTEX1D1Q8N7M0 179 aa20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 ZNF383Q8NA42 475 aa20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 Q9N2K0 584 aa20.86■□□□□ 0.93
SNRPA1-215ENST00000561187 TRBV6-6A0A0A6YYG2 114 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 IGKV1-6A0A0C4DH72 117 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 TRIM64CA6NLI5 447 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 SLC17A2O00624 439 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 PROP1O75360 226 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 RBBP9O75884 186 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 GP9P14770 177 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 PITPNAQ00169 270 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 RCHY1Q96PM5 261 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 CMSS1Q9BQ75 279 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 PECRQ9BY49 303 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 RIMS4Q9H426 269 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 ZNF355PQ9NSJ1 428 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 ZNF221Q9UK13 617 aa20.85■□□□□ 0.93
SNRPA1-215ENST00000561187 SLC25A17O43808 307 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 CD3GP09693 182 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 AQP4P55087 323 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 TMEM50BP56557 158 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 DEFA5Q01523 94 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 PLA2G7Q13093 441 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 IRF3Q14653 427 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 CD200R1LQ6Q8B3 271 aa20.84■□□□□ 0.93
SNRPA1-215ENST00000561187 FOXI3A8MTJ6 420 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 M0R1X1 148 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 ITGB1BP1O14713 200 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 TRGV3P03979 118 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 FRMD6-AS1P0C7T7 363 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 PYHIN1Q6K0P9 492 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 ACSM6Q6P461 480 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 OR6Q1Q8NGQ2 317 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 RSRP1Q9BUV0 290 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 GHITMQ9H3K2 345 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 RDH8Q9NYR8 311 aa20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 NKX1-2Q9UD57 310 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-215ENST00000561187 APOA2P02652 100 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 TFAP2AP05549 437 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 OR8U9P0C7N5 309 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 CD37P11049 281 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 CALRP27797 417 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 PLAC9Q5JTB6 97 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 HES5Q5TA89 166 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 FAM89BQ8N5H3 189 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 TSNAXQ99598 290 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 CCDC90BQ9GZT6 254 aa20.82■□□□□ 0.92
SNRPA1-215ENST00000561187 ARPC1BO15143 372 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 HSPB1P04792 205 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 FXYD3Q14802 87 aa20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 ZNF562Q6V9R5 426 aa20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 OR5T1Q8NG75 326 aa20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 OR4C12Q96R67 309 aa20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 SLC35D1Q9NTN3 355 aa20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 HSF4Q9ULV5 492 aa20.81■□□□□ 0.92
SNRPA1-215ENST00000561187 MGAT4AQ9UM21 535 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms