RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 OR5H6Q8NGV6 325 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 PTX4Q96A99 478 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 SLC25A38Q96DW6 304 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 CHCHD6Q9BRQ6 235 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 CENPOQ9BU64 300 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 GNB4Q9HAV0 340 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 PARP11Q9NR21 331 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 DNAH3Q8TD57 4116 aa9.89□□□□□ -0.83
CHRNA3-208ENST00000561128 ITGB1BP1O14713 200 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 RAB29O14966 203 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 BET1O15155 118 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 SSX5O60225 188 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 IGHG4P01861 327 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 HLA-DRB1P01911 266 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 IGF1P05019 195 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 ZBTB25P24278 435 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 PSMB8P28062 276 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 PPIFP30405 207 aaKnown RBP9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 SDC2P34741 201 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 MXD1Q05195 221 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 MYOZ3Q8TDC0 251 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 NUDCD2Q8WVJ2 157 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 FCGR1BQ92637 280 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 OR51J1Q9H342 316 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 RIMS4Q9H426 269 aaPredicted RBP9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 Q9H521 79 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 PIPOXQ9P0Z9 390 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 DAPK2Q9UIK4 370 aa9.88□□□□□ -0.83
CHRNA3-208ENST00000561128 WI2-2373I1.2A0A1W2PRP0 233 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 NOTOA8MTQ0 251 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 K7EIL1 84 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 RRHO14718 337 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 HSPA12AO43301 675 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 FOXE3Q13461 319 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 PNLIPRP3Q17RR3 467 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 KCTD21Q4G0X4 260 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 SFXN4Q6P4A7 337 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 ZNF695Q8IW36 515 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 OR4A4PQ8NGN8 299 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 FAM103A1Q9BTL3 118 aaKnown RBP9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 YTHDF1Q9BYJ9 559 aaKnown RBP9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 TOLLIPQ9H0E2 274 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 ATG5Q9H1Y0 275 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 OR2D2Q9H210 308 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 NECAP2Q9NVZ3 263 aa9.87□□□□□ -0.83
CHRNA3-208ENST00000561128 TRBV6-7A0A0A0MS04 114 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 LOC100506127A0A0U1RQW1 187 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 TMEM235A6NFC5 223 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 OR5H14A6NHG9 310 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 M0R1X1 148 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 OR8U9P0C7N5 309 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 PTHLHP12272 177 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 PSMD7P51665 324 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 LUMP51884 338 aaPredicted RBP9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 GNB1P62873 340 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 SLC35B1P78383 322 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 CX3CL1P78423 397 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 ECSCRQ19T08 205 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 MRGPRG-AS1Q2M3A8 158 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 TEX38Q6PEX7 206 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 OR8U1Q8NH10 309 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 OR5B12Q96R08 314 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 CLCC1Q96S66 551 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 ALX4Q9H161 411 aaPredicted RBP9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 SDHAF2Q9NX18 166 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 WASHC3Q9Y3C0 194 aa9.86□□□□□ -0.83
CHRNA3-208ENST00000561128 TRAV41A0A0B4J266 112 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 H7C2Y5 167 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 CCL24O00175 119 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 ARPC1BO15143 372 aaKnown RBP9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 IGLV2-23P01705 113 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 CD36P16671 472 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 VDAC1P21796 283 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 PJVKQ0ZLH3 352 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 PSG5Q15238 335 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 ZNF260Q3ZCT1 412 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 CDNFQ49AH0 187 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 CXorf66Q5JRM2 361 aaPredicted RBP9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 H1FOOQ8IZA3 346 aaPredicted RBP9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 COMMD1Q8N668 190 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 MRAPQ8TCY5 172 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 EDARADDQ8WWZ3 215 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 RCC1LQ96I51 464 aaKnown RBP9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 ZFP57Q9NU63 452 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 MGAT4AQ9UM21 535 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 SSR3Q9UNL2 185 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 A3GALT2U3KPV4 340 aa9.85□□□□□ -0.83
CHRNA3-208ENST00000561128 IGKV1D-13A0A0B4J2D9 117 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 J3QRK9 145 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 RRP9O43818 475 aaKnown RBP9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 CA2P00918 260 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 TFAP2AP05549 437 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 ELANEP08246 267 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 IGKV1-13P0DP09 117 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 MYCNOSP40205 109 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 CRIP2P52943 208 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms