RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 USMG5Q96IX5 58 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 TEAD3Q99594 435 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 ZNF251Q9BRH9 671 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 FNDC11Q9BVV2 318 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 TXLNGYQ9BZA5 131 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 FBXL15Q9H469 300 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 NCOR1P1Q9H4R4 102 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 RNF167Q9H6Y7 350 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 ROPN1Q9HAT0 212 aaPredicted RBP2.59□□□□□ -1.99
HERC1-211ENST00000560983 HMG20AQ9NP66 347 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 GPR84Q9NQS5 396 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 KRT84Q9NSB2 600 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 DCAF13Q9NV06 445 aaKnown RBP2.59□□□□□ -1.99
HERC1-211ENST00000560983 RNF150Q9ULK6 438 aa2.59□□□□□ -1.99
HERC1-211ENST00000560983 MEIKINA0A087WXM9 373 aa2.58□□□□□ -2
HERC1-211ENST00000560983 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.58□□□□□ -2
HERC1-211ENST00000560983 TRBV2A0A0J9YWF9 115 aa2.58□□□□□ -2
HERC1-211ENST00000560983 FAM230AA0A1W2PPH8 454 aa2.58□□□□□ -2
HERC1-211ENST00000560983 PMS2P5A8MQ11 134 aa2.58□□□□□ -2
HERC1-211ENST00000560983 ZNF705EA8MWA4 302 aaPredicted RBP2.58□□□□□ -2
HERC1-211ENST00000560983 C15orf65H3BRN8 121 aa2.58□□□□□ -2
HERC1-211ENST00000560983 SH2D1BO14796 132 aa2.58□□□□□ -2
HERC1-211ENST00000560983 TXNL1O43396 289 aa2.58□□□□□ -2
HERC1-211ENST00000560983 IDH3BO43837 385 aa2.58□□□□□ -2
HERC1-211ENST00000560983 OR2C1O95371 312 aa2.58□□□□□ -2
HERC1-211ENST00000560983 HLA-AP01891 365 aaKnown RBP2.58□□□□□ -2
HERC1-211ENST00000560983 GYPBP06028 91 aa2.58□□□□□ -2
HERC1-211ENST00000560983 H2BFMP0C1H6 154 aa2.58□□□□□ -2
HERC1-211ENST00000560983 C8orf88P0DMB2 117 aa2.58□□□□□ -2
HERC1-211ENST00000560983 CLUP10909 449 aa2.58□□□□□ -2
HERC1-211ENST00000560983 PRKACAP17612 351 aa2.58□□□□□ -2
HERC1-211ENST00000560983 FMO3P31513 532 aa2.58□□□□□ -2
HERC1-211ENST00000560983 SLC1A6P48664 564 aa2.58□□□□□ -2
HERC1-211ENST00000560983 ATP1B3P54709 279 aa2.58□□□□□ -2
HERC1-211ENST00000560983 SNU13P55769 128 aaKnown RBP2.58□□□□□ -2
HERC1-211ENST00000560983 MTPNP58546 118 aa2.58□□□□□ -2
HERC1-211ENST00000560983 DLK1P80370 383 aa2.58□□□□□ -2
HERC1-211ENST00000560983 TMEM187Q14656 261 aa2.58□□□□□ -2
HERC1-211ENST00000560983 ATXN7L3Q14CW9 347 aaPredicted RBP2.58□□□□□ -2
HERC1-211ENST00000560983 UBE2V2Q15819 145 aa2.58□□□□□ -2
HERC1-211ENST00000560983 CYP51A1Q16850 503 aa2.58□□□□□ -2
HERC1-211ENST00000560983 SPIN3Q5JUX0 258 aa2.58□□□□□ -2
HERC1-211ENST00000560983 ZC2HC1BQ5TFG8 222 aa2.58□□□□□ -2
HERC1-211ENST00000560983 BTNL8Q6UX41 500 aa2.58□□□□□ -2
HERC1-211ENST00000560983 Q6ZSR3 168 aa2.58□□□□□ -2
HERC1-211ENST00000560983 NOTCH2NLQ7Z3S9 236 aa2.58□□□□□ -2
HERC1-211ENST00000560983 TMEM179BQ7Z7N9 219 aa2.58□□□□□ -2
HERC1-211ENST00000560983 GPHB5Q86YW7 130 aa2.58□□□□□ -2
HERC1-211ENST00000560983 FAM86B1Q8N7N1 296 aa2.58□□□□□ -2
HERC1-211ENST00000560983 EIF1ADQ8N9N8 165 aaKnown RBP2.58□□□□□ -2
HERC1-211ENST00000560983 C15orf53Q8NAA6 179 aa2.58□□□□□ -2
HERC1-211ENST00000560983 ZNF439Q8NDP4 499 aa2.58□□□□□ -2
HERC1-211ENST00000560983 OR52M1Q8NGK5 317 aa2.58□□□□□ -2
HERC1-211ENST00000560983 OR2T4Q8NH00 348 aa2.58□□□□□ -2
HERC1-211ENST00000560983 OR10A6Q8NH74 314 aa2.58□□□□□ -2
HERC1-211ENST00000560983 KCNG3Q8TAE7 436 aa2.58□□□□□ -2
HERC1-211ENST00000560983 CD300LFQ8TDQ1 290 aa2.58□□□□□ -2
HERC1-211ENST00000560983 SPDL1Q96EA4 605 aa2.58□□□□□ -2
HERC1-211ENST00000560983 FAM210BQ96KR6 192 aa2.58□□□□□ -2
HERC1-211ENST00000560983 OR52B2Q96RD2 323 aa2.58□□□□□ -2
HERC1-211ENST00000560983 CNN2Q99439 309 aaKnown RBP2.58□□□□□ -2
HERC1-211ENST00000560983 NMNAT2Q9BZQ4 307 aa2.58□□□□□ -2
HERC1-211ENST00000560983 COMMD4Q9H0A8 199 aa2.58□□□□□ -2
HERC1-211ENST00000560983 OR52D1Q9H346 318 aa2.58□□□□□ -2
HERC1-211ENST00000560983 EXOSC4Q9NPD3 245 aaKnown RBP2.58□□□□□ -2
HERC1-211ENST00000560983 FAM212BQ9NTI7 297 aaPredicted RBP2.58□□□□□ -2
HERC1-211ENST00000560983 FAM206AQ9NX38 181 aa2.58□□□□□ -2
HERC1-211ENST00000560983 PTTG2Q9NZH5 202 aa2.58□□□□□ -2
HERC1-211ENST00000560983 ZNF230Q9UIE0 474 aaPredicted RBP2.58□□□□□ -2
HERC1-211ENST00000560983 KIF25Q9UIL4 384 aa2.58□□□□□ -2
HERC1-211ENST00000560983 TMEM5Q9Y2B1 443 aa2.58□□□□□ -2
HERC1-211ENST00000560983 GSTK1Q9Y2Q3 226 aa2.58□□□□□ -2
HERC1-211ENST00000560983 TRAV24A0A0B4J272 114 aa2.57□□□□□ -2
HERC1-211ENST00000560983 IGKV3D-20A0A0C4DH25 116 aa2.57□□□□□ -2
HERC1-211ENST00000560983 IGKV1-12A0A0C4DH73 117 aa2.57□□□□□ -2
HERC1-211ENST00000560983 A0A1B0GTI1 187 aa2.57□□□□□ -2
HERC1-211ENST00000560983 ACOD1A6NK06 481 aa2.57□□□□□ -2
HERC1-211ENST00000560983 C15orf61A6NNL5 157 aa2.57□□□□□ -2
HERC1-211ENST00000560983 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
HERC1-211ENST00000560983 PPP5D1E7EU14 171 aa2.57□□□□□ -2
HERC1-211ENST00000560983 TSPAN4O14817 238 aa2.57□□□□□ -2
HERC1-211ENST00000560983 DEGS1O15121 323 aa2.57□□□□□ -2
HERC1-211ENST00000560983 UBDO15205 165 aa2.57□□□□□ -2
HERC1-211ENST00000560983 LANCL1O43813 399 aa2.57□□□□□ -2
HERC1-211ENST00000560983 DHRS3O75911 302 aa2.57□□□□□ -2
HERC1-211ENST00000560983 ZNF682O95780 498 aa2.57□□□□□ -2
HERC1-211ENST00000560983 CA1P00915 261 aaPredicted RBP2.57□□□□□ -2
HERC1-211ENST00000560983 IGKV1D-12P01611 117 aa2.57□□□□□ -2
HERC1-211ENST00000560983 MIFP14174 115 aa2.57□□□□□ -2
HERC1-211ENST00000560983 SPI1P17947 270 aa2.57□□□□□ -2
HERC1-211ENST00000560983 FUT3P21217 361 aa2.57□□□□□ -2
HERC1-211ENST00000560983 IFNA8P32881 189 aa2.57□□□□□ -2
HERC1-211ENST00000560983 GLP1RP43220 463 aa2.57□□□□□ -2
HERC1-211ENST00000560983 MRPL19P49406 292 aaKnown RBP2.57□□□□□ -2
HERC1-211ENST00000560983 CRISP1P54107 249 aa2.57□□□□□ -2
HERC1-211ENST00000560983 SELENOWP63302 87 aa2.57□□□□□ -2
HERC1-211ENST00000560983 PAX5Q02548 391 aa2.57□□□□□ -2
HERC1-211ENST00000560983 SCN1BQ07699 218 aa2.57□□□□□ -2
HERC1-211ENST00000560983 CDK5R1Q15078 307 aa2.57□□□□□ -2
HERC1-211ENST00000560983 CYBRD1Q53TN4 286 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms