RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CEACAM3P40198 252 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 MECP2P51608 486 aaKnown RBP11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 LGALS4P56470 323 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 RPL39P5Q59GN2 51 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 PLET1Q6UQ28 207 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 CCBE1Q6UXH8 406 aaPredicted RBP11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 CMTM1Q8IZ96 169 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 TEX29Q8N6K0 151 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 MINDY2Q8NBR6 621 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 CHPT1Q8WUD6 406 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 S1PR3Q99500 378 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 MARVELD1Q9BSK0 173 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 NUDT15Q9NV35 164 aa11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 C14orf166Q9Y224 244 aaKnown RBP11.06□□□□□ -0.64
HMBOX1-213ENST00000560269 ARPC1BO15143 372 aaKnown RBP11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 PGLYRP1O75594 196 aaPredicted RBP11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 SAA4P35542 130 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 RAG2P55895 527 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 PIGPP57054 158 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 ZNF816Q0VGE8 651 aaPredicted RBP11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 DIAPH2-AS1Q14236 149 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 ZNF66Q6ZN08 573 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 LHFPL4Q7Z7J7 247 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 SLC25A42Q86VD7 318 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 CCDC71LQ8N9Z2 235 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 ADAD2Q8NCV1 583 aaKnown RBP11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 NANPQ8TBE9 248 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 TMEM230Q96A57 120 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 MALSU1Q96EH3 234 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 ALX4Q9H161 411 aaPredicted RBP11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 ACANP16112 2415 aa11.05□□□□□ -0.64
HMBOX1-213ENST00000560269 TRAV6A0A075B6T7 132 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 A8MV72 311 aaPredicted RBP11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 OOSP1A8MZH6 123 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 M0R1X1 148 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 TXNL1O43396 289 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 LY6G6DO95868 133 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 GAPDHP04406 335 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 RLN1P04808 185 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 S100GP29377 79 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 DUTP33316 252 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 TAS2R31P59538 309 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 DHODHQ02127 395 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 TRIM16LQ309B1 348 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 PHLDA2Q53GA4 152 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 RUSC1-AS1Q66K80 236 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 TMED4Q7Z7H5 227 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 RTN4IP1Q8WWV3 396 aaPredicted RBP11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 RPEQ96AT9 228 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 HSD17B10Q99714 261 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 SMR3AQ99954 134 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 NUP50Q9UKX7 468 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 HIVEP1P15822 2718 aa11.04□□□□□ -0.64
HMBOX1-213ENST00000560269 CRYM-AS1A6NIL9 109 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 INMT-MINDY4F8WBC2 141 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 MPPED1O15442 326 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 TNFSF12O43508 249 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 PEX14O75381 377 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 CT45A6P0DMU7 189 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 CT45A5P0DMU8 189 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 CT45A7P0DMV0 189 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 ANXA7P20073 488 aaKnown RBP11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 EPHA1P21709 976 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 THBS3P49746 956 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 UBE2MP61081 183 aaKnown RBP11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 TMEM128Q5BJH2 165 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 C9orf139Q6ZV77 190 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 KCTD9Q7L273 389 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 TBC1D26Q86UD7 250 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 TGIF2LXQ8IUE1 241 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 OR8H3Q8N146 312 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 DDB2Q92466 427 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 ADTRPQ96IZ2 230 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 NABP2Q9BQ15 211 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
HMBOX1-213ENST00000560269 ANK3Q12955 4377 aaKnown RBP11.02□□□□□ -0.64
HMBOX1-213ENST00000560269 IGHV1-3A0A0C4DH29 117 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 LINC00473A8K010 186 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 RNF212BA8MTL3 300 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 VSIG10L2P0DP72 767 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 AKR1C4P17516 323 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 F2RP25116 425 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 REG1BP48304 166 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 CATR1Q13166 79 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 FAM120AOSQ5T036 256 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 DYNAPQ8N1N2 210 aa11.02□□□□□ -0.65
HMBOX1-213ENST00000560269 ZNF383Q8NA42 475 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms