RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ZNF585BQ52M93 769 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 MARC2Q969Z3 335 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 SDSLQ96GA7 329 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 LPAR3Q9UBY5 353 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 A0A0G2JRQ6 117 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 RAB19A4D1S5 217 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 ATG12O94817 140 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 EPHA1P21709 976 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 CAV2P51636 162 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 EIF4EBP1Q13541 118 aaPredicted RBP14.76□□□□□ -0.05
SNX1-208ENST00000559844 UQCC3Q6UW78 93 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 OR1S2Q8NGQ3 325 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 RNF150Q9ULK6 438 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 FAM24AA6NFZ4 105 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 C17orf100A8MU93 164 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 ZNF705EA8MWA4 302 aaPredicted RBP14.75□□□□□ -0.05
SNX1-208ENST00000559844 TEX46H3BTG2 121 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 SULT1A2P50226 295 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 BAXQ07812 192 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 EFNB3Q15768 340 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 STUMQ69YW2 141 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 ZNF66Q6ZN08 573 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 MAGT1Q9H0U3 335 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 ZNF665Q9H7R5 613 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 BAHCC1Q9P281 2608 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 FBN2P35556 2912 aa14.75□□□□□ -0.05
SNX1-208ENST00000559844 B9A039 149 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 SOD3P08294 240 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 SEC11BP0C7V7 166 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 DANCRP0C864 163 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 MUC1P15941 1255 aaPredicted RBP14.74□□□□□ -0.05
SNX1-208ENST00000559844 LPAR6P43657 344 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 BLOC1S1P78537 153 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 NHLH2Q02577 135 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 MST1LQ2TV78 715 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 CLEC9AQ6UXN8 241 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 TMEM252Q8N6L7 170 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 ZNRF1Q8ND25 227 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 RFESDQ8TAC1 157 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 BSCL2Q96G97 398 aaPredicted RBP14.74□□□□□ -0.05
SNX1-208ENST00000559844 SMIM8Q96KF7 97 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 LINC00052Q96N35 136 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 RAB40CQ96S21 281 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 GINS3Q9BRX5 216 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 FAM234AQ9H0X4 552 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 LAMP3Q9UQV4 416 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 SPG11Q96JI7 2443 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 ABCA12Q86UK0 2595 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 TACC2O95359 2948 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 IGHV3-43A0A0B4J1X8 118 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 LRRC30A6NM36 301 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 F2RL2O00254 374 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 YPEL1O60688 119 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 CYB5R3P00387 301 aaPredicted RBP14.74□□□□□ -0.05
SNX1-208ENST00000559844 IGKV1-5P01602 117 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 IGHV3-43DP0DP04 118 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 EDDM3BP56851 147 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 RPL23AP62750 156 aaKnown RBP14.74□□□□□ -0.05
SNX1-208ENST00000559844 TEX36Q5VZQ5 186 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 YPEL2Q96QA6 119 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 HSD17B10Q99714 261 aaKnown RBP14.74□□□□□ -0.05
SNX1-208ENST00000559844 DCTN5Q9BTE1 182 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 WFDC1Q9HC57 220 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 NUP50Q9UKX7 468 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 MMP24Q9Y5R2 645 aa14.74□□□□□ -0.05
SNX1-208ENST00000559844 IGSF23A1L1A6 192 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 CHST1O43916 411 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 ZNF266Q14584 549 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 SWI5Q1ZZU3 235 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 FAM209AQ5JX71 171 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 EGLN1Q9GZT9 426 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 MMP26Q9NRE1 261 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 CBLN4Q9NTU7 201 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 GNG12Q9UBI6 72 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 CACNG5Q9UF02 275 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 LGALS8O00214 317 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 FBXO24O75426 580 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 KRTAP10-9P60411 292 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 FAM201AQ5SY85 155 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 IL34Q6ZMJ4 242 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 DTX2Q86UW9 622 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 STPG2Q8N412 459 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 NRGNQ92686 78 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 C5orf30Q96GV9 206 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 DYNLRB1Q9NP97 96 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 COA4Q9NYJ1 87 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 PSG11Q9UQ72 335 aa14.73□□□□□ -0.05
SNX1-208ENST00000559844 KIAA1324LA8MWY0 1029 aaPredicted RBP14.72□□□□□ -0.05
SNX1-208ENST00000559844 MED6O75586 246 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 MORN2Q502X0 79 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 FGFRL1Q8N441 504 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 TCTEX1D2Q8WW35 142 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 GAFA1Q96PS6 74 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 CALYQ9NYX4 217 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 NBPF19A0A087WUL8 3843 aa14.72□□□□□ -0.05
SNX1-208ENST00000559844 NKX6-3A6NJ46 265 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 FAM90A26D6RGX4 464 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 ST8SIA5O15466 376 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 RPL30P62888 115 aaKnown RBP14.71□□□□□ -0.05
SNX1-208ENST00000559844 FAM53AQ6NSI3 398 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms