RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CD5LO43866 347 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 DHFRP00374 187 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 IGHV1-69P01742 117 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 IGHV4-38-2P0DP08 117 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 VAMP1P23763 118 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 HTR1DP28221 377 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 DIAPH2-AS1Q14236 149 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 MSMO1Q15800 293 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 C4orf46Q504U0 113 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 OR2B11Q5JQS5 317 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 RUSC1-AS1Q66K80 236 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 C1orf229Q6ZS94 237 aaPredicted RBP8.47□□□□□ -1.05
TPM1-221ENST00000559831 ZNF833PQ6ZTB9 187 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 LHFPL4Q7Z7J7 247 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 TBC1D26Q86UD7 250 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 SGPP2Q8IWX5 399 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 DRAXINQ8NBI3 349 aaPredicted RBP8.47□□□□□ -1.05
TPM1-221ENST00000559831 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.47□□□□□ -1.05
TPM1-221ENST00000559831 ZBTB34Q8NCN2 500 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 OR51H1Q8NH63 302 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 TCTEX1D2Q8WW35 142 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 RTN4IP1Q8WWV3 396 aaPredicted RBP8.47□□□□□ -1.05
TPM1-221ENST00000559831 RPEQ96AT9 228 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 C18orf12Q96KH6 178 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 SEC22CQ9BRL7 303 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 MARVELD1Q9BSK0 173 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 MRPL20Q9BYC9 149 aaKnown RBP8.47□□□□□ -1.05
TPM1-221ENST00000559831 NAA60Q9H7X0 242 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 FLNAP21333 2647 aaKnown RBP8.47□□□□□ -1.05
TPM1-221ENST00000559831 CRYM-AS1A6NIL9 109 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 RNF212BA8MTL3 300 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 LEUTXA8MZ59 168 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 MPPED1O15442 326 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 PGLYRP1O75594 196 aaPredicted RBP8.46□□□□□ -1.06
TPM1-221ENST00000559831 OR4E1P0C645 316 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 EPHA1P21709 976 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 SAA4P35542 130 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 CEACAM3P40198 252 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 LINC00205P59089 165 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 RND3P61587 244 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 RPL30P62888 115 aaKnown RBP8.46□□□□□ -1.06
TPM1-221ENST00000559831 KRTAP1-1Q07627 177 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 CATR1Q13166 79 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 SLC9A3R2Q15599 337 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 TPTE2P1Q5T6R2 138 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 BRD3OSQ6XYD6 125 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 GLDNQ6ZMI3 551 aaPredicted RBP8.46□□□□□ -1.06
TPM1-221ENST00000559831 KCTD9Q7L273 389 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 OR52B4Q8NGK2 314 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 CASTOR1Q8WTX7 329 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 ZNF251Q9BRH9 671 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 GHITMQ9H3K2 345 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 DPM3Q9P2X0 92 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 GAB2Q9UQC2 676 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
TPM1-221ENST00000559831 HILPDAQ9Y5L2 63 aa8.46□□□□□ -1.06
TPM1-221ENST00000559831 C3orf85A0A1B0GTC6 90 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 LINC00473A8K010 186 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 PROP1O75360 226 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 SFT2D2O95562 160 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 HLA-AP01891 365 aaKnown RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 OR5AC1P0C628 307 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 PAX6P26367 422 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 DUTP33316 252 aaKnown RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 THBS3P49746 956 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 ZNF137PP52743 207 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 RAG2P55895 527 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 UBE2MP61081 183 aaKnown RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 DHODHQ02127 395 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 CBX3Q13185 183 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 DHRS2Q13268 280 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 EIF4EBP1Q13541 118 aaPredicted RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 SSX2Q16385 188 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 TATDN3Q17R31 274 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 SP6Q3SY56 376 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 MIDNQ504T8 468 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 KLF17Q5JT82 389 aaPredicted RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 LDLRAD2Q5SZI1 272 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 MINOS1Q5TGZ0 78 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 FAM71F2Q6NXP2 309 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 C11orf88Q6PI97 169 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 ZNF66Q6ZN08 573 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 LYG2Q86SG7 212 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 MOB3BQ86TA1 216 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 C17orf50Q8WW18 174 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 ST6GALNAC6Q969X2 333 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 HSD17B10Q99714 261 aaKnown RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 GPN1Q9HCN4 374 aaPredicted RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 LIN7CQ9NUP9 197 aaKnown RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 PRR13Q9NZ81 148 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 ALG5Q9Y673 324 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 MINOS1-NBL1R4GNA1 71 aa8.45□□□□□ -1.06
TPM1-221ENST00000559831 MAP1AP78559 2803 aaPredicted RBP8.45□□□□□ -1.06
TPM1-221ENST00000559831 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms