RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 OR1A1Q9P1Q5 309 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ZNF230Q9UIE0 474 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 ZNF107Q9UII5 783 aaPredicted RBP3.47□□□□□ -1.85
SNX1-205ENST00000559339 RNF150Q9ULK6 438 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 SPATA2Q9UM82 520 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 WASHC3Q9Y3C0 194 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 ANK2Q01484 3957 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 DNHD1Q96M86 4753 aa3.47□□□□□ -1.85
SNX1-205ENST00000559339 WNK1Q9H4A3 2382 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 TRBV6-7A0A0A0MS04 114 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 TMEM235A6NFC5 223 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 NUDT19A8MXV4 375 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 ZNF736B4DX44 427 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 H0YJW9 148 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 M0R1X1 148 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 XRCC3O43542 346 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 SLC22A5O76082 557 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 DUS4LO95620 317 aaKnown RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 TSPAN15O95858 294 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 IGF1P05019 195 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 TFAP2AP05549 437 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CT45A6P0DMU7 189 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CT45A5P0DMU8 189 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CT45A7P0DMV0 189 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 RRASP10301 218 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CD33P20138 364 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CBX5P45973 191 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 LGALS7P47929 136 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 RORCP51449 518 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 LUMP51884 338 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 F2RL1P55085 397 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 RPS16P62249 146 aaKnown RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 LSM3P62310 102 aaKnown RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 TMEM267Q0VDI3 215 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 PLA2G7Q13093 441 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 RTL8BQ17RB0 113 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 C5orf64Q2M2E5 130 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 FBLN7Q53RD9 439 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 IGSF11Q5DX21 431 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CXorf66Q5JRM2 361 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 UBE2NLQ5JXB2 153 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 TMEM69Q5SWH9 247 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 FAM131AQ6UXB0 335 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 Q6ZPA2 131 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 Q6ZS49 121 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 ZNF329Q86UD4 541 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 PDPNQ86YL7 162 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 Q8N6K4 173 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 DRAXINQ8NBI3 349 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 NPBQ8NG41 125 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 OR5AN1Q8NGI8 311 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 WIPF2Q8TF74 440 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 AP3S1Q92572 193 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 SLC25A46Q96AG3 418 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 YIPF6Q96EC8 236 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 ABHD14BQ96IU4 210 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 ADTRPQ96IZ2 230 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 NOL4LQ96MY1 436 aaPredicted RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 TSNAXQ99598 290 aaKnown RBP3.46□□□□□ -1.86
SNX1-205ENST00000559339 NABP2Q9BQ15 211 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 CABLES2Q9BTV7 478 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 FUNDC2Q9BWH2 189 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 OR2D2Q9H210 308 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 RNF167Q9H6Y7 350 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 PLSCR3Q9NRY6 295 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 ANXA10Q9UJ72 324 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 LINC00527Q9UJ94 153 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 GAB2Q9UQC2 676 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 TRRAPQ9Y4A5 3859 aa3.46□□□□□ -1.86
SNX1-205ENST00000559339 TRAV18A0A075B6X5 111 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 IGKV1-6A0A0C4DH72 117 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 RRHO14718 337 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 SHOXO15266 292 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 CREBL2O60519 120 aaPredicted RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 ACTL6BO94805 426 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 NDUFA3O95167 84 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 SPDEFO95238 335 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 CNIH1O95406 144 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 HLA-DRB1P01911 266 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 IGKV1-16P04430 117 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ELANEP08246 267 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 CLEC2LP0C7M8 214 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 RPS19P39019 145 aaKnown RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 VBP1P61758 197 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 DEFA6Q01524 100 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 FOXE3Q13461 319 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ZNF260Q3ZCT1 412 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ZNF660Q6AZW8 331 aaPredicted RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 PYHIN1Q6K0P9 492 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 MZT2AQ6P582 158 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 CNIH2Q6PI25 160 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ZNF562Q6V9R5 426 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 GLDNQ6ZMI3 551 aaPredicted RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 GPR141Q7Z602 305 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 C5orf24Q7Z6I8 188 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ZNF695Q8IW36 515 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 H1FOOQ8IZA3 346 aaPredicted RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 ZNF645Q8N7E2 425 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 TCTEX1D1Q8N7M0 179 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 SAMD12Q8N8I0 201 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms