RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 RNF5Q99942 180 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 SULT4A1Q9BR01 284 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 THAP7Q9BT49 309 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 C9orf16Q9BUW7 83 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 CLEC2DQ9UHP7 191 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 SLC22A1O15245 554 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 MYL12AP19105 171 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 IL34Q6ZMJ4 242 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 SVOPQ8N4V2 548 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 POC5Q8NA72 575 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 PARP12Q9H0J9 701 aaKnown RBP12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 RETNQ9HD89 108 aa12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 EXOSC1Q9Y3B2 195 aaKnown RBP12.38□□□□□ -0.43
CDC42BPB-205ENST00000559245 A0A0G2JLM5 398 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 H3BUA1 57 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 FXYD3Q14802 87 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 MOGAT2Q3SYC2 334 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 OGFRL1Q5TC84 451 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 C6orf201Q7Z4U5 140 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 OR5T1Q8NG75 326 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 GRPEL2Q8TAA5 225 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 DERL3Q96Q80 235 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 TSNAXQ99598 290 aaKnown RBP12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 DIMT1Q9UNQ2 313 aaKnown RBP12.37□□□□□ -0.43
CDC42BPB-205ENST00000559245 PNMA8CA0A1B0GUJ8 204 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 IRGMA1A4Y4 181 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 ITGB1BP1O14713 200 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 SPDEFO95238 335 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 CPEP16870 476 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 LCN12Q6JVE5 192 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 NKAIN3Q8N8D7 197 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 FAM110AQ9BQ89 295 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 HIPK2Q9H2X6 1198 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 GHRLQ9UBU3 117 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 ADAM30Q9UKF2 790 aa12.36□□□□□ -0.43
CDC42BPB-205ENST00000559245 IZUMO1RA6ND01 250 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 NAPSAO96009 420 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 CSN3P07498 182 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 OR10K2Q6IF99 312 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 Q8N402 240 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 DRAXINQ8NBI3 349 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 ZNF485Q8NCK3 441 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 C8orf4Q9NR00 106 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 CEPT1Q9Y6K0 416 aa12.35□□□□□ -0.43
CDC42BPB-205ENST00000559245 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 SLC25A17O43808 307 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 PROP1O75360 226 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 CNIH1O95406 144 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 LINC00205P59089 165 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 DEFA5Q01523 94 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 MED21Q13503 144 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 TATDN3Q17R31 274 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 ZNF555Q8NEP9 628 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 NRG4Q8WWG1 115 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 EDARADDQ8WWZ3 215 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 TMEM80Q96HE8 168 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 PLEKHA3Q9HB20 300 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 SIGLEC8Q9NYZ4 499 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 OR1A1Q9P1Q5 309 aa12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 PEF1Q9UBV8 284 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-205ENST00000559245 FRAS1Q86XX4 4008 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 UBBP0CG47 229 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 AADACP22760 399 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 HTR2CP28335 458 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 CEACAM6P40199 344 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 TAS2R43P59537 309 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 RPS27AP62979 156 aaKnown RBP12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 ZNF343Q6P1L6 599 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 MOB1BQ7L9L4 216 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 PDPNQ86YL7 162 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 ZNF383Q8NA42 475 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 NICN1Q9BSH3 213 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
CDC42BPB-205ENST00000559245 APOA2P02652 100 aa12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 ZBTB25P24278 435 aa12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 PJVKQ0ZLH3 352 aa12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 RPEL1Q2QD12 228 aa12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 TMEM68Q96MH6 324 aa12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 KRTAP17-1Q9BYP8 105 aa12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 TINAGL1Q9GZM7 467 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-205ENST00000559245 BRI3O95415 125 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 CELP19835 753 aa12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 MAPK3P27361 379 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPB-205ENST00000559245 MECP2P51608 486 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms