RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RPL14P50914 215 aaKnown RBP5.31□□□□□ -1.56
CASC4-208ENST00000559151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.31□□□□□ -1.56
CASC4-208ENST00000559151 KRTAP4-4Q9BYR3 166 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 HDHD2Q9H0R4 259 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 SYCP2Q9BX26 1530 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 ARHGAP35Q9NRY4 1499 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 TNS1Q9HBL0 1735 aaKnown RBP5.31□□□□□ -1.56
CASC4-208ENST00000559151 CLIP1P30622 1438 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 MYOM1P52179 1685 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 NRKQ7Z2Y5 1582 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 ASXL1Q8IXJ9 1541 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 LRRC26Q2I0M4 334 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 HCP5Q6MZN7 132 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 MSRB3Q8IXL7 192 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 FAM9CQ8IZT9 166 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 LMX1AQ8TE12 382 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 PSMD13Q9UNM6 376 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 KIAA1107Q9UPP5 1409 aa5.3□□□□□ -1.56
CASC4-208ENST00000559151 LGALS3P17931 250 aaKnown RBP5.29□□□□□ -1.56
CASC4-208ENST00000559151 ACTBP60709 375 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 ACTG1P63261 375 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 MESTQ5EB52 335 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 UBQLN4Q9NRR5 601 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 TP53TG1Q9Y2A0 90 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 MTCH2Q9Y6C9 303 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 V9GYY5 206 aaPredicted RBP5.29□□□□□ -1.56
CASC4-208ENST00000559151 DISP2A7MBM2 1401 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 CRB1P82279 1406 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 NCOA3Q9Y6Q9 1424 aa5.29□□□□□ -1.56
CASC4-208ENST00000559151 BRD4O60885 1362 aaPredicted RBP5.29□□□□□ -1.56
CASC4-208ENST00000559151 NUP188Q5SRE5 1749 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 RREB1Q92766 1687 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 MYO5BQ9ULV0 1848 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 CCDC18Q5T9S5 1454 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 A0A1W2PNM2 257 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 DENRO43583 198 aaKnown RBP5.28□□□□□ -1.56
CASC4-208ENST00000559151 HPGDSO60760 199 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 CD99P14209 185 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 COTL1Q14019 142 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 CST6Q15828 149 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 ZFAND2AQ8N6M9 145 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 CD200R1Q8TD46 325 aa5.28□□□□□ -1.56
CASC4-208ENST00000559151 CARHSP1Q9Y2V2 147 aaKnown RBP5.28□□□□□ -1.56
CASC4-208ENST00000559151 CDS2O95674 445 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 CFL1P23528 166 aaKnown RBP5.27□□□□□ -1.57
CASC4-208ENST00000559151 PDK2Q15119 407 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 Q6ZRU5 148 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 PLCZ1Q86YW0 608 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 OR10D4PQ8NGN7 298 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 MFSD8Q8NHS3 518 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 WDR90Q96KV7 1748 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 UBAP1Q9NZ09 502 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 TMEM2Q9UHN6 1383 aa5.27□□□□□ -1.57
CASC4-208ENST00000559151 PLEKHH2Q8IVE3 1493 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 CASKIN1Q8WXD9 1431 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 GOLGA8KD6RF30 607 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 GOLGA8MH3BSY2 632 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 HIST1H1CP16403 213 aaKnown RBP5.26□□□□□ -1.57
CASC4-208ENST00000559151 PPP1CCP36873 323 aaKnown RBP5.26□□□□□ -1.57
CASC4-208ENST00000559151 COILP38432 576 aaPredicted RBP5.26□□□□□ -1.57
CASC4-208ENST00000559151 DNM1P34Q6PK57 102 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 MED18Q9BUE0 208 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 SNX10Q9Y5X0 201 aa5.26□□□□□ -1.57
CASC4-208ENST00000559151 CASZ1Q86V15 1759 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 DLC1Q96QB1 1528 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 TINCRA0A1B0GVN0 87 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 E7EQL1 145 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 HBZP02008 142 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 EMP2P54851 167 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 PLEKHJ1Q9NW61 149 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 FYCO1Q9BQS8 1478 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 MBD5Q9P267 1494 aa5.25□□□□□ -1.57
CASC4-208ENST00000559151 PCNTO95613 3336 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 IGSF23A1L1A6 192 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 AZIN1O14977 448 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 OR13C7P0DN81 318 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 MROQ9BYG7 248 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 FAM206AQ9NX38 181 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 VPREB3Q9UKI3 123 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 ERVK-7P63135 1459 aa5.24□□□□□ -1.57
CASC4-208ENST00000559151 SLIT2O94813 1529 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 ZW10O43264 779 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 CTSGP08311 255 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 UGT2B7P16662 529 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 DAD1P61803 113 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 TMEM251Q8N6I4 163 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 OR51H1Q8NH63 302 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 ACY3Q96HD9 319 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 MRPL16Q9NX20 251 aaKnown RBP5.23□□□□□ -1.57
CASC4-208ENST00000559151 MRPS16Q9Y3D3 137 aaKnown RBP5.23□□□□□ -1.57
CASC4-208ENST00000559151 GOLGB1Q14789 3259 aaKnown RBP5.23□□□□□ -1.57
CASC4-208ENST00000559151 PIK3C2BO00750 1634 aa5.23□□□□□ -1.57
CASC4-208ENST00000559151 CYGBQ8WWM9 190 aa5.22□□□□□ -1.57
CASC4-208ENST00000559151 ABHD14BQ96IU4 210 aa5.22□□□□□ -1.57
CASC4-208ENST00000559151 SLC22A4Q9H015 551 aa5.22□□□□□ -1.57
CASC4-208ENST00000559151 DRC3Q9H069 523 aa5.22□□□□□ -1.57
CASC4-208ENST00000559151 MS4A6AQ9H2W1 248 aa5.22□□□□□ -1.57
CASC4-208ENST00000559151 PARVAQ9NVD7 372 aa5.22□□□□□ -1.57
CASC4-208ENST00000559151 DNAJC12Q9UKB3 198 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms