RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 JOSD2Q8TAC2 188 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 ZNF721Q8TF20 911 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 OPTNQ96CV9 577 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 MS4A6EQ96DS6 147 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 IMP4Q96G21 291 aaKnown RBP1.33□□□□□ -2.2
GABPB1-209ENST00000559100 SLC25A44Q96H78 314 aaPredicted RBP1.33□□□□□ -2.2
GABPB1-209ENST00000559100 TBX5Q99593 518 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 B9D2Q9BPU9 175 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 OR51I2Q9H344 312 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 XPNPEP1Q9NQW7 623 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 PCYT1BQ9Y5K3 369 aaPredicted RBP1.33□□□□□ -2.2
GABPB1-209ENST00000559100 KIAA1671Q9BY89 1806 aa1.33□□□□□ -2.2
GABPB1-209ENST00000559100 TICRRQ7Z2Z1 1910 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 SSH2Q76I76 1423 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 SVILO95425 2214 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 ARAP3Q8WWN8 1544 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 A0A1W2PQL4 384 aaPredicted RBP1.32□□□□□ -2.2
GABPB1-209ENST00000559100 IGSF23A1L1A6 192 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 GGTLC3B5MD39 225 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 M0R381 172 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 TP53I11O14683 189 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 FSTL3O95633 263 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 MT-CO2P00403 227 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 OPN1SWP03999 348 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 CD7P09564 240 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 ESDP10768 282 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 SLC25A16P16260 332 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 OR10J1P30954 320 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 MAP2K4P45985 399 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 LINC00313P59037 77 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 TAS2R45P59539 299 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 RPS24P62847 133 aaKnown RBP1.32□□□□□ -2.2
GABPB1-209ENST00000559100 AESQ08117 197 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 FABP9Q0Z7S8 132 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 SLC9A3R2Q15599 337 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 CST6Q15828 149 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 HIST3H3Q16695 136 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 LCE1BQ5T7P3 118 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 IGFL1Q6UW32 110 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 C5orf46Q6UWT4 87 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
GABPB1-209ENST00000559100 MSRB3Q8IXL7 192 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 LRRC34Q8IZ02 419 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 ZNF567Q8N184 647 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 C3orf22Q8N5N4 141 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 OR4K13Q8NH42 304 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 CDC26Q8NHZ8 85 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 DEDD2Q8WXF8 326 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 OR5P3Q8WZ94 311 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 DGCR14Q96DF8 476 aaKnown RBP1.32□□□□□ -2.2
GABPB1-209ENST00000559100 IGF2BP2-AS1Q96M15 143 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 HIGD2AQ9BW72 106 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 C1QTNF6Q9BXI9 259 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 CXorf21Q9HAI6 301 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 VPS29Q9UBQ0 182 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 SNX12Q9UMY4 172 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 MRPS16Q9Y3D3 137 aaKnown RBP1.32□□□□□ -2.2
GABPB1-209ENST00000559100 LINC00588Q9Y4M8 146 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 OR51B4Q9Y5P0 310 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 PXMP4Q9Y6I8 212 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 ARID1AO14497 2285 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 CRB1P82279 1406 aa1.32□□□□□ -2.2
GABPB1-209ENST00000559100 CHD2O14647 1828 aaKnown RBP1.31□□□□□ -2.2
GABPB1-209ENST00000559100 BRWD3Q6RI45 1802 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 TMED7-TICAM2A0A0A6YYA0 188 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 A0A1B0GV50 99 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 DISC1C4P0D8 188 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 LECT2O14960 151 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 TRAPPC3O43617 180 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 IGKV1-17P01599 117 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 IGLV3-19P01714 112 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 IGLV3-27P01718 113 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 TCRBP04435 133 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 IFNA6P05013 189 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 LPAR6P43657 344 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 DAPP51397 102 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 FOXA1P55317 472 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 GNA12Q03113 381 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 IHHQ14623 411 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 TMED2Q15363 201 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 MRPL51Q4U2R6 128 aaKnown RBP1.31□□□□□ -2.2
GABPB1-209ENST00000559100 PYCR3Q53H96 274 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 SPIN3Q5JUX0 258 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 AMMECR1LQ6DCA0 310 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 RASL11AQ6T310 242 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 SBSNQ6UWP8 590 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 AMTNQ6UX39 209 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 CALHM3Q86XJ0 350 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 C1orf174Q8IYL3 243 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 OR11H1Q8NG94 326 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 OR1M1Q8NGA1 313 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 GPR32P1Q8NGA4 272 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 OR2D3Q8NGH3 330 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 CD200R1Q8TD46 325 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 RAB2BQ8WUD1 216 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 DCUN1D1Q96GG9 259 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 OR8B2Q96RD0 313 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 ULBP3Q9BZM4 244 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms