RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PSMB11A5LHX3 300 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 ZNF736B4DX44 427 aaPredicted RBP6.72□□□□□ -1.33
TPM1-213ENST00000558400 XRCC3O43542 346 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 TFAP2AP05549 437 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 OR8U9P0C7N5 309 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 CT45A6P0DMU7 189 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 CT45A5P0DMU8 189 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 CT45A7P0DMV0 189 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 OR5H8P0DN80 308 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 CD28P10747 220 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 CBX5P45973 191 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 RORCP51449 518 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 ACTBP60709 375 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 LSM3P62310 102 aaKnown RBP6.72□□□□□ -1.33
TPM1-213ENST00000558400 MMDQ15546 238 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 IGSF11Q5DX21 431 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 LIN54Q6MZP7 749 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 ANKRD13BQ86YJ7 626 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 C11orf44Q8N8P7 122 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 NPBQ8NG41 125 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 OR4F17Q8NGA8 305 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 OR5H6Q8NGV6 325 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 OR8U1Q8NH10 309 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 ACOT12Q8WYK0 555 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 SLC25A46Q96AG3 418 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 ABHD14BQ96IU4 210 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 CYYR1Q96J86 154 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 OR4F4Q96R69 305 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 MRPL20Q9BYC9 149 aaKnown RBP6.72□□□□□ -1.33
TPM1-213ENST00000558400 MRPS26Q9BYN8 205 aaKnown RBP6.72□□□□□ -1.33
TPM1-213ENST00000558400 ZFP57Q9NU63 452 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 ZNF580Q9UK33 172 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 RNF150Q9ULK6 438 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 WASHC3Q9Y3C0 194 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 TSSC4Q9Y5U2 329 aaPredicted RBP6.72□□□□□ -1.33
TPM1-213ENST00000558400 TMEM235A6NFC5 223 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 H0YJW9 148 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 H7C2Y5 167 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 NBR2O15453 112 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 APOA2P02652 100 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 RRASP10301 218 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 SLC6A1P30531 599 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 LGALS7P47929 136 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 LUMP51884 338 aaPredicted RBP6.71□□□□□ -1.34
TPM1-213ENST00000558400 F2RL1P55085 397 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 CBX3Q13185 183 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 FBLN7Q53RD9 439 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 UBE2NLQ5JXB2 153 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 MZT2AQ6P582 158 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 H1FOOQ8IZA3 346 aaPredicted RBP6.71□□□□□ -1.34
TPM1-213ENST00000558400 STPG2Q8N412 459 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 FAM71E2Q8N5Q1 922 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 ADTRPQ96IZ2 230 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 TSNAXQ99598 290 aaKnown RBP6.71□□□□□ -1.34
TPM1-213ENST00000558400 CITED2Q99967 270 aaPredicted RBP6.71□□□□□ -1.34
TPM1-213ENST00000558400 ANXA10Q9UJ72 324 aa6.71□□□□□ -1.34
TPM1-213ENST00000558400 SH2D7A6NKC9 451 aaPredicted RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 M0R1X1 148 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 PROP1O75360 226 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 NDUFA3O95167 84 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 HLA-DRB1P01911 266 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 APOA1P02647 267 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 IGF1P05019 195 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 VBP1P61758 197 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 RPS16P62249 146 aaKnown RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 TMEM267Q0VDI3 215 aaPredicted RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 C5orf64Q2M2E5 130 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 NSUN5P1Q3KNT7 163 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 TMEM95Q3KNT9 176 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 ZNF660Q6AZW8 331 aaPredicted RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 GPR141Q7Z602 305 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 PDPNQ86YL7 162 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 SAMD12Q8N8I0 201 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 BEST4Q8NFU0 473 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 FAM110DQ8TAY7 271 aaPredicted RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 NUDCD2Q8WVJ2 157 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 MAFIPQ8WZ33 124 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 AP3S1Q92572 193 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 FLYWCH2Q96CP2 140 aaKnown RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 R3HDM4Q96D70 268 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 SLC25A38Q96DW6 304 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 PARP12Q9H0J9 701 aaKnown RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 AUNIPQ9H7T9 357 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 ZNF107Q9UII5 783 aaPredicted RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 ELF5Q9UKW6 265 aaPredicted RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 OR2W1Q9Y3N9 320 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 NBEAL2Q6ZNJ1 2754 aa6.7□□□□□ -1.34
TPM1-213ENST00000558400 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
TPM1-213ENST00000558400 IGKV1D-8A0A087WSZ0 117 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 RRHO14718 337 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 SSX5O60225 188 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 TPPPO94811 219 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 GABARAPO95166 117 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 SPDEFO95238 335 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 HLA-DQB1P01920 261 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 ELANEP08246 267 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 SMIM18P0DKX4 95 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms