RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 YTHDC2Q9H6S0 1430 aaKnown RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 ZNF638Q14966 1978 aaKnown RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 UHRF1BP1LA0JNW5 1464 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 GRIN2BQ13224 1484 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 KIAA1671Q9BY89 1806 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 IGLV2-18A0A075B6J9 118 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TRAV8-4A0A0B4J246 113 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 GMNCA6NCL1 334 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 A6NDN8 102 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 RBFOX3A6NFN3 312 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 E7EQ34 232 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 F6UZH7 168 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 J3QT63 122 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 K7ERU9 68 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PEX7O00628 323 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 ARL6IP5O75915 188 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TNFSF15O95150 251 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 AIFM1O95831 613 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 P01737 135 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 C1QBP02746 253 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TTRP02766 147 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TSPAN19P0C672 248 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 SLC35G6P0C7Q6 338 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 UBBP0CG47 229 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 MPC1LP0DKB6 136 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 SPI1P17947 270 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 ATF1P18846 271 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TCN2P20062 427 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 DDTP30046 118 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 S100A11P31949 105 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 BTCP35070 178 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 EVX1P49640 407 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 EMP1P54849 157 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PIGPP57054 158 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 DEFA3P59666 94 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 RAP1AP62834 184 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 EMX1Q04741 257 aaPredicted RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 MXD1Q05195 221 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PRDX4Q13162 271 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PMAIP1Q13794 54 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PMVKQ15126 192 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TAF9Q16594 264 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 CEACAM16Q2WEN9 425 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 AKR1C8PQ5T2L2 129 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 LCN12Q6JVE5 192 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 CNIH2Q6PI25 160 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 AGTRAPQ6RW13 159 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 FA2HQ7L5A8 372 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 C4orf33Q8N1A6 199 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 CBR4Q8N4T8 237 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 Q8N976 141 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 OR13C4Q8NGS5 318 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 OR2G3Q8NGZ4 309 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 OR10D3Q8NH80 312 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 ZNRF2Q8NHG8 242 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 CANT1Q8WVQ1 401 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 MBD3L1Q8WWY6 194 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TMEM230Q96A57 120 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PIK3IP1Q96FE7 263 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 NARS2Q96I59 477 aaKnown RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 BIRC8Q96P09 236 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 ZNF649Q9BS31 505 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PDCD10Q9BUL8 212 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 RIOK2Q9BVS4 552 aaKnown RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 EBPLQ9BY08 206 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 SLCO1B3Q9NPD5 702 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 UQCC1Q9NVA1 299 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 DMAC2Q9NW81 257 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TAS2R5Q9NYW4 299 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 VAX2Q9UIW0 290 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 PRNDQ9UKY0 176 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 BTRCQ9Y297 605 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 RFNGQ9Y644 331 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 U3KQ87 197 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TTC37Q6PGP7 1564 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 NUP210Q8TEM1 1887 aaPredicted RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 DNMT1P26358 1616 aaKnown RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 COL1A2P08123 1366 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 TET2Q6N021 2002 aaPredicted RBP1.83□□□□□ -2.12
SPG11-206ENST00000558093 ZNF609O15014 1411 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 MIA2Q96PC5 1412 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 ATG2BQ96BY7 2078 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 ERICH3Q5RHP9 1530 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 MYO15BQ96JP2 1530 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 SBF1O95248 1867 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 CCDC88AQ3V6T2 1871 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 LOC102724200A0A096LPH7 203 aaPredicted RBP1.82□□□□□ -2.12
SPG11-206ENST00000558093 A0A096LPI6 279 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 A0A0U1RQV1 116 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 hADV38S2A0JD32 116 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 C20orf202A1L168 122 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 TMEM189A5PLL7 270 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 TRAPPC13A5PLN9 417 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 ZNF726A6NNF4 738 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 ZNF850A8MQ14 1090 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 LINC01619G3V211 115 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 GGCTO75223 188 aaKnown RBP1.82□□□□□ -2.12
SPG11-206ENST00000558093 RDH16O75452 317 aa1.82□□□□□ -2.12
SPG11-206ENST00000558093 GCM2O75603 506 aaPredicted RBP1.82□□□□□ -2.12
SPG11-206ENST00000558093 REM1O75628 298 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms