RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-234ENST00000557703 OR5H2Q8NGV7 314 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 OR56B4Q8NH76 319 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 DEDD2Q8WXF8 326 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 SNAPC3Q92966 411 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 NABP2Q9BQ15 211 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 ZNF251Q9BRH9 671 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 PRSS22Q9GZN4 317 aa10.97□□□□□ -0.65
SHMT2-234ENST00000557703 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 FABP12A6NFH5 140 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 SNRNP70P08621 437 aaKnown RBP10.96□□□□□ -0.65
SHMT2-234ENST00000557703 OR8U9P0C7N5 309 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 TNFSF8P32971 234 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 RAG2P55895 527 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 HES1Q14469 280 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 LY6EQ16553 131 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-234ENST00000557703 LPCAT3Q6P1A2 487 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 CCBE1Q6UXH8 406 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-234ENST00000557703 TMEM17Q86X19 198 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 OR6F1Q8NGZ6 308 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 OR8U1Q8NH10 309 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 SMIM4Q8WVI0 70 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 ABHD1Q96SE0 405 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 SOSTQ9BQB4 213 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 SLC25A33Q9BSK2 321 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 TNFRSF19Q9NS68 423 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 MOB4Q9Y3A3 225 aa10.96□□□□□ -0.65
SHMT2-234ENST00000557703 GSTZ1O43708 216 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-234ENST00000557703 IGKV1D-33P01593 117 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 IGKV1-33P01594 117 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 APOA2P02652 100 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 CT45A6P0DMU7 189 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 CT45A5P0DMU8 189 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 CT45A7P0DMV0 189 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 TMEM11P17152 192 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 FCGR2CP31995 323 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 ETV6P41212 452 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 REG1BP48304 166 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 CBX3Q13185 183 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 IL18Q14116 193 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 SPANXN2Q5MJ10 180 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 VAX1Q5SQQ9 334 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 LYSMD2Q8IV50 215 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 ARRDC1Q8N5I2 433 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 Q8N6K4 173 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 OR2T6Q8NHC8 308 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 ABHD14BQ96IU4 210 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-234ENST00000557703 DCUN1D5Q9BTE7 237 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 OR2D2Q9H210 308 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 WASHC3Q9Y3C0 194 aa10.95□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF736B4DX44 427 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 PPYP01298 95 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 CSF1P09603 554 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 PTHLHP12272 177 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 NFYAP23511 347 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 PAX6P26367 422 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 LGALS7P47929 136 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 THBS3P49746 956 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 TAS2R19P59542 299 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 C12orf54Q6X4T0 127 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF66Q6ZN08 573 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 Q6ZSV7 163 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 PDPNQ86YL7 162 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 HSD17B10Q99714 261 aaKnown RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 MDFIQ99750 246 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 MRPL20Q9BYC9 149 aaKnown RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 PARP12Q9H0J9 701 aaKnown RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 LIN7CQ9NUP9 197 aaKnown RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 SDHAF2Q9NX18 166 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 EHFQ9NZC4 300 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 RNF150Q9ULK6 438 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 RBMX2Q9Y388 322 aaKnown RBP10.94□□□□□ -0.66
SHMT2-234ENST00000557703 PRELID3BQ9Y3B1 194 aa10.94□□□□□ -0.66
SHMT2-234ENST00000557703 A6NHS1 94 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 H0YJW9 148 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 CHST1O43916 411 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 PROP1O75360 226 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 IFNA6P05013 189 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 S100GP29377 79 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 HRH1P35367 487 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 HERV-K104P61576 105 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 TSPAN5P62079 268 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 MEF2DQ14814 521 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 RTL8BQ17RB0 113 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 AWAT1Q58HT5 328 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 RPL39P5Q59GN2 51 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF660Q6AZW8 331 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-234ENST00000557703 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 TMEM229BQ8NBD8 167 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 NPBQ8NG41 125 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 OR52I2Q8NH67 350 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 AIFM2Q9BRQ8 373 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 KLK11Q9UBX7 282 aa10.93□□□□□ -0.66
SHMT2-234ENST00000557703 M0R1X1 148 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms