RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ZNF343Q6P1L6 599 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 LFNGQ8NES3 379 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 UNKLQ9H9P5 680 aaKnown RBP12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 H3BQ15 152 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 PITX3O75364 302 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 LYG1Q8N1E2 194 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 GINS3Q9BRX5 216 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 A0A1B0GU03 582 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 PGA5P0DJD9 388 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 LYL1P12980 280 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 ITLN1Q8WWA0 313 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 TMEM204Q9BSN7 226 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 ZDHHC11Q9H8X9 412 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 ENY2Q9NPA8 101 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 MOB1BQ7L9L4 216 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 A0A1W2PPV4 95 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 HBE1P02100 147 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 HOXA1P49639 335 aaPredicted RBP12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 RPL30P62888 115 aaKnown RBP12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 PDLIM3Q53GG5 364 aaPredicted RBP12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 NMSQ5H8A3 153 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 NCMAPQ5T1S8 102 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 SLC16A13Q7RTY0 426 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 TMPRSS5Q9H3S3 457 aa12.91□□□□□ -0.34
TMEM55B-207ENST00000557041 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 ZNF891A8MT65 544 aaPredicted RBP12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 ID3Q02535 119 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 Q6P435 159 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 LRTM2Q8N967 370 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CACNA1AO00555 2505 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 ADAMTS20P59510 1910 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 IGKV1-5P01602 117 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 MMP9P14780 707 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 DLK1P80370 383 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 HMGN3Q15651 99 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 RPL39P5Q59GN2 51 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 OR4F5Q8NH21 305 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CCL17Q92583 94 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 OR4F4Q96R69 305 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 DECR2Q9NUI1 292 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 RALYQ9UKM9 306 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CARHSP1Q9Y2V2 147 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CYB5BO43169 146 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CTRB1P17538 263 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 TAS2R30P59541 319 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 ACSF3Q4G176 576 aaPredicted RBP12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 ZNF497Q6ZNH5 498 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 RND1Q92730 232 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 RBKSQ9H477 322 aa12.9□□□□□ -0.34
TMEM55B-207ENST00000557041 IGHV2OR16-5A0A0B4J2B6 119 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 TMPRSS2O15393 492 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 CLDN14O95500 239 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 CYB5R3P00387 301 aaPredicted RBP12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 RAB39BQ96DA2 213 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 SCAF4O95104 1147 aaKnown RBP12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 ARL16Q0P5N6 197 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 DAZAP2Q15038 168 aaPredicted RBP12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 FFAR4Q5NUL3 377 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 Q6ZSR3 168 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 CCL13Q99616 98 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 SMIM7Q9BQ49 75 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF292O60281 2723 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 ACP7Q6ZNF0 438 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 S1PR3Q99500 378 aa12.89□□□□□ -0.35
TMEM55B-207ENST00000557041 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 MALRD1Q5VYJ5 2156 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 CD5P06127 495 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 EGR1P18146 543 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 REG1BP48304 166 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 ERVFRD-1P60508 538 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 PRB3Q04118 309 aaPredicted RBP12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 HFEQ30201 348 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 LINC00596Q86U02 117 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 R3HDM4Q96D70 268 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 ODAMA1E959 279 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 IFNA1P01562 189 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 SSMEM1Q8WWF3 244 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
TMEM55B-207ENST00000557041 PRSS44E7EML9 344 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 IGKV1-39P01597 117 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms